Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3294	Ppp5c	protein phosphatase 5, catalytic subunit	7	7 4.0 cM	19060
Gene Ontology	cytoplasm | cytosol | hydrolase activity | manganese ion binding | nucleus | phosphoprotein phosphatase activity | protein amino acid dephosphorylation | protein binding | protein serine/threonine phosphatase activity | protein serine/threonine phosphatase complex
Human Homolog	PPP5C[protein phosphatase 5, catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTCCTCCCC 9.8 0.0098 P8 Cb GC GTGGCCGCTG 1.6 0.0016 Cb medulloblastoma GCTCCTCCCC 9.2 0.0092 Cb medulloblastoma CAGGTGAAGG 2.3 0.0023 P8 GC+1d culture GCTCCTCCCC 6.8 0.0068 P8 GC+SHH+1d culture GCTCCTCCCC 7 0.007 P8 GC+SHH+1d culture CAGGTGAAGG 2.3 0.0023 3T3 fibroblasts GCTCCTCCCC 7 0.007 E15 cortex GCTCCTCCCC 9.9 0.0099 P1 cortex GCTCCTCCCC 4.5 0.0045 Hypothalamus GCTCCTCCCC 1.8 0.0018 E12.5 retina GCTCCTCCCC 16.9 0.0169 E12.5 retina CAGGTGAAGG 3.8 0.0038 E14.5 retina GCTCCTCCCC 5.5 0.0055 E14.5 retina CAGGTGAAGG 3.6 0.0036 E14.5 retina GTGGCCGCTG 1.8 0.0018 E16.5 retina GCTCCTCCCC 9.1 0.0091 E16.5 retina GTGGCCGCTG 3.6 0.0036 E18.5 retina GCTCCTCCCC 1.8 0.0018 P0.5 retina GCTCCTCCCC 7.9 0.0079 P0.5 retina CAGGTGAAGG 5.9 0.0059 P0.5 retina GTGGCCGCTG 2 0.002 P2.5 retina GCTCCTCCCC 7 0.007 P4.5 retina GCTCCTCCCC 7.9 0.0079 P4.5 retina GTGGCCGCTG 4 0.004 P6.5 retina GCTCCTCCCC 6.7 0.0067 P10.5 crx- retina GCTCCTCCCC 11.1 0.0111 P10.5 crx+ retina GCTCCTCCCC 11.5 0.0115 P10.5 crx+ retina GTGGCCGCTG 1.9 0.0019 Adult retinal GCTCCTCCCC 5.6 0.0056 ONL GCTCCTCCCC 1.9 0.0019