Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.329655	Cfl1	cofilin 1, non-muscle	19		12631
Gene Ontology	actin binding | cortical actin cytoskeleton | cytoskeleton | intracellular | nucleus
Human Homolog	CFL1[cofilin 1 (non-muscle)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 110 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGCAGGAC 174.6 0.1746 P8 Cb GC GGATGGGGAG (2) 62 0.062 P8 Cb GC TAATAAATAA (2) 19.6 0.0196 P8 Cb GC CTGCCAACTT 4.9 0.0049 P8 Cb GC AATTACAAGC 3.3 0.0033 Cb medulloblastoma GAAGCAGGAC 106.4 0.1064 Cb medulloblastoma GGATGGGGAG (2) 41.6 0.0416 Cb medulloblastoma TAATAAATAA (2) 6.9 0.0069 Cb medulloblastoma AATCACAAGC 4.6 0.0046 Cb medulloblastoma AAGGTTCGCA 2.3 0.0023 Cb medulloblastoma CTGCCAACTT 2.3 0.0023 P8 GC+1d culture GAAGCAGGAC 189.5 0.1895 P8 GC+1d culture GGATGGGGAG (2) 50.2 0.0502 P8 GC+1d culture TAATAAATAA (2) 32 0.032 P8 GC+1d culture CTGCCAACTT 22.8 0.0228 P8 GC+1d culture AATTACAAGC 12.6 0.0126 P8 GC+1d culture GAAGCAGGGC 1.1 0.0011 P8 GC+SHH+1d culture GAAGCAGGAC 159.2 0.1592 P8 GC+SHH+1d culture GGATGGGGAG (2) 39.8 0.0398 P8 GC+SHH+1d culture TAATAAATAA (2) 32.8 0.0328 P8 GC+SHH+1d culture CTGCCAACTT 21.1 0.0211 P8 GC+SHH+1d culture AATTACAAGC 3.5 0.0035 P8 GC+SHH+1d culture AAGGTTCGCA 1.2 0.0012 P8 GC+SHH+1d culture AATCACAAGC 1.2 0.0012 3T3 fibroblasts GAAGCAGGAC 115.7 0.1157 3T3 fibroblasts GGATGGGGAG (2) 31.5 0.0315 3T3 fibroblasts CTGCCAACTT 10.5 0.0105 E15 cortex GAAGCAGGAC 217.7 0.2177 E15 cortex CTGCCAACTT 19.8 0.0198 E15 cortex GGATGGGGAG (2) 14.8 0.0148 E15 cortex GAAACAGGAC 4.9 0.0049 P1 cortex GAAGCAGGAC 181.8 0.1818 P1 cortex GGATGGGGAG (2) 18.2 0.0182 P1 cortex CTGCCAACTT 9.1 0.0091 P1 cortex GAAGCAGGGC 9.1 0.0091 P1 cortex AATTACAAGC 4.5 0.0045 Hypothalamus GAAGCAGGAC 182.9 0.1829 Hypothalamus TAATAAATAA (2) 43.5 0.0435 Hypothalamus GGATGGGGAG (2) 38 0.038 Hypothalamus AATTACAAGC 9.1 0.0091 Hypothalamus AAGGTTCGCA 1.8 0.0018 Hypothalamus AATCACAAGC 1.8 0.0018 Hypothalamus CTGCCAACTT 1.8 0.0018 E12.5 retina GAAGCAGGAC 240.3 0.2403 E12.5 retina GGATGGGGAG (2) 105.1 0.1051 E12.5 retina TAATAAATAA (2) 39.4 0.0394 E12.5 retina AATCACAAGC 5.6 0.0056 E12.5 retina AATTACAAGC 5.6 0.0056 E12.5 retina CTGCCAACTT 1.9 0.0019 E14.5 retina GAAGCAGGAC 174.9 0.1749 E14.5 retina TAATAAATAA (2) 60.1 0.0601 E14.5 retina GGATGGGGAG (2) 25.5 0.0255 E14.5 retina AATTACAAGC 5.5 0.0055 E14.5 retina AAGGTTCGCA 1.8 0.0018 E14.5 retina CTGCCAACTT 1.8 0.0018 E14.5 retina GAAGCAGGGC 1.8 0.0018 E16.5 retina GAAGCAGGAC 148.5 0.1485 E16.5 retina TAATAAATAA (2) 36.2 0.0362 E16.5 retina GGATGGGGAG (2) 34.4 0.0344 E16.5 retina CTGCCAACTT 16.3 0.0163 E16.5 retina AAGGTTCGCA 1.8 0.0018 E16.5 retina AATTACAAGC 1.8 0.0018 E16.5 retina GAAGCAGGGC 1.8 0.0018 E18.5 retina GAAGCAGGAC 209.2 0.2092 E18.5 retina TAATAAATAA (2) 92.8 0.0928 E18.5 retina GGATGGGGAG (2) 54.6 0.0546 E18.5 retina CTGCCAACTT 5.5 0.0055 E18.5 retina AATTACAAGC 1.8 0.0018 P0.5 retina GAAGCAGGAC 135.4 0.1354 P0.5 retina GGATGGGGAG (2) 60.8 0.0608 P0.5 retina TAATAAATAA (2) 27.5 0.0275 P0.5 retina AATTACAAGC 2 0.002 P2.5 retina GAAGCAGGAC 200.6 0.2006 P2.5 retina GGATGGGGAG (2) 89.7 0.0897 P2.5 retina TAATAAATAA (2) 72.2 0.0722 P2.5 retina AATTACAAGC 5.3 0.0053 P2.5 retina CTGCCAACTT 5.3 0.0053 P2.5 retina GAAGCAGGGC 3.5 0.0035 P2.5 retina AATCACAAGC 1.8 0.0018 P4.5 retina GAAGCAGGAC 247.7 0.2477 P4.5 retina TAATAAATAA (2) 77.3 0.0773 P4.5 retina GGATGGGGAG (2) 57.5 0.0575 P4.5 retina AATTACAAGC 2 0.002 P6.5 retina GAAGCAGGAC 158.4 0.1584 P6.5 retina GGATGGGGAG (2) 76.7 0.0767 P6.5 retina TAATAAATAA (2) 68.4 0.0684 P6.5 retina AATTACAAGC 3.3 0.0033 P6.5 retina AATCACAAGC 1.7 0.0017 P6.5 retina CTGCCAACTT 1.7 0.0017 P6.5 retina GAAACAGGAC 1.7 0.0017 P10.5 crx- retina GAAGCAGGAC 44.6 0.0446 P10.5 crx- retina GGATGGGGAG (2) 16.7 0.0167 P10.5 crx- retina AATTACAAGC 13 0.013 P10.5 crx- retina TAATAAATAA (2) 11.1 0.0111 P10.5 crx- retina CTGCCAACTT 9.3 0.0093 P10.5 crx- retina AATCACAAGC 1.9 0.0019 P10.5 crx- retina GAAACAGGAC 1.9 0.0019 P10.5 crx+ retina GAAGCAGGAC 155.7 0.1557 P10.5 crx+ retina GGATGGGGAG (2) 75 0.075 P10.5 crx+ retina TAATAAATAA (2) 15.4 0.0154 P10.5 crx+ retina AATTACAAGC 1.9 0.0019 P10.5 crx+ retina CTGCCAACTT 1.9 0.0019 Adult retinal GAAGCAGGAC 53.7 0.0537 Adult retinal GGATGGGGAG (2) 18.5 0.0185 Adult retinal TAATAAATAA (2) 5.6 0.0056 Adult retinal GAAACAGGAC 1.9 0.0019 ONL GGATGGGGAG (2) 38.3 0.0383 ONL GAAGCAGGAC 26.8 0.0268 ONL TAATAAATAA (2) 23 0.023 ONL AATCACAAGC 1.9 0.0019