Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.333349
Prkwnk1
protein kinase, lysine deficient 1
6
232341
Mm.333349
4833412E19Rik
RIKEN cDNA 4833412E19 gene
6
73905
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTGTTTGG
(
2
)
4.9
0.0049
P8 Cb GC
GCTAAAGCTA
(
2
)
3.3
0.0033
P8 Cb GC
TAACTTTGCC
(
5
)
1.6
0.0016
Cb medulloblastoma
ACCCCAGCAG
(
2
)
2.3
0.0023
Cb medulloblastoma
TGGTGTTTGG
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGTGTTTGG
(
2
)
2.3
0.0023
P8 GC+1d culture
CTGCATTTGG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TAACTTTGCC
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
CTGCATTTGG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TCACAGCAAC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGTGTTTGG
(
2
)
1.2
0.0012
3T3 fibroblasts
TGGTGTTTGG
(
2
)
14
0.014
3T3 fibroblasts
GCTAAAGCTA
(
2
)
7
0.007
3T3 fibroblasts
CTGCATTTGG
(
2
)
3.5
0.0035
3T3 fibroblasts
GTGGCACTTG
(
2
)
3.5
0.0035
E15 cortex
TGGTGTTTGG
(
2
)
9.9
0.0099
E15 cortex
GCTAAAGCTA
(
2
)
4.9
0.0049
P1 cortex
TGGTGTTTGG
(
2
)
4.5
0.0045
Hypothalamus
TGGTGTTTGG
(
2
)
5.4
0.0054
Hypothalamus
TCACAGCAAC
(
3
)
1.8
0.0018
E12.5 retina
GCTAAAGCTA
(
2
)
1.9
0.0019
E12.5 retina
TGGTGTTTGG
(
2
)
1.9
0.0019
E14.5 retina
GCCTAAGGCT
(
2
)
5.5
0.0055
E14.5 retina
TAACTTTGCC
(
5
)
1.8
0.0018
E16.5 retina
TAACTTTGCC
(
5
)
1.8
0.0018
E16.5 retina
TCACAGCAAC
(
3
)
1.8
0.0018
E18.5 retina
TGGTGTTTGG
(
2
)
1.8
0.0018
P0.5 retina
TGGTGTTTGG
(
2
)
5.9
0.0059
P0.5 retina
CTGCATTTGG
(
2
)
2
0.002
P2.5 retina
CTGCATTTGG
(
2
)
3.5
0.0035
P2.5 retina
GCTAAAGCTA
(
2
)
1.8
0.0018
P2.5 retina
TAACTTTGCC
(
5
)
1.8
0.0018
P2.5 retina
TGGTGTTTGG
(
2
)
1.8
0.0018
P4.5 retina
TGGTGTTTGG
(
2
)
4
0.004
P4.5 retina
ACCCCAGCAG
(
2
)
2
0.002
P4.5 retina
GCTAAAGCTA
(
2
)
2
0.002
P4.5 retina
TAACTTTGCC
(
5
)
2
0.002
P6.5 retina
ACCCCAGCAG
(
2
)
1.7
0.0017
P6.5 retina
TAACTTTGCC
(
5
)
1.7
0.0017
P6.5 retina
TCACAGCAAC
(
3
)
1.7
0.0017
P6.5 retina
TGGTGTTTGG
(
2
)
1.7
0.0017
P10.5 crx+ retina
TAACTTTGCC
(
5
)
1.9
0.0019
Adult retinal
CTGCATTTGG
(
2
)
1.9
0.0019
Adult retinal
TCACAGCAAC
(
3
)
1.9
0.0019
ONL
GTGGCACTTG
(
2
)
3.8
0.0038
ONL
GCCTAAGGCT
(
2
)
1.9
0.0019
ONL
TGGTGTTTGG
(
2
)
1.9
0.0019
