Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.336743	Hspa8	heat shock protein 8	9	9 24.0 cM	15481
Gene Ontology	ATP binding | ATPase activity, coupled | chaperone activity | nucleus | protein binding | protein folding | regulation of cell cycle | response to heat | response to unfolded protein
Human Homolog	HSPA8[heat shock 70kDa protein 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATAATAAA 168 0.168 P8 Cb GC CCACCTGCAC 4.9 0.0049 P8 Cb GC GAAAGGTGGA 3.3 0.0033 P8 Cb GC GTCCAAGAAG (2) 3.3 0.0033 P8 Cb GC CACAATTACA 1.6 0.0016 P8 Cb GC CGCTCAATAT 1.6 0.0016 P8 Cb GC GAAAGGTTGA 1.6 0.0016 P8 Cb GC GCCCTTTCAC 1.6 0.0016 P8 Cb GC GGATAATAAA 1.6 0.0016 P8 Cb GC TTGAAGGCAT 1.6 0.0016 Cb medulloblastoma GAATAATAAA 152.6 0.1526 Cb medulloblastoma CCACCTGCAC 4.6 0.0046 Cb medulloblastoma GGATAATAAA 4.6 0.0046 Cb medulloblastoma ACCAAGGACA 2.3 0.0023 Cb medulloblastoma CACAATTACA 2.3 0.0023 Cb medulloblastoma GAAAGGTTGA 2.3 0.0023 Cb medulloblastoma GAATAATAAG 2.3 0.0023 Cb medulloblastoma GTTCTGACAA 2.3 0.0023 Cb medulloblastoma TTGAAGGCAT 2.3 0.0023 P8 GC+1d culture GAATAATAAA 147.3 0.1473 P8 GC+1d culture TTGAAGGCAT 3.4 0.0034 P8 GC+1d culture AAAGCAACTG 2.3 0.0023 P8 GC+1d culture CCACCTGCAC 2.3 0.0023 P8 GC+1d culture CCTGGGGGAA 2.3 0.0023 P8 GC+1d culture GGATAATAAA 2.3 0.0023 P8 GC+1d culture CGCTCAATAT 1.1 0.0011 P8 GC+1d culture GAAAGGTGGA 1.1 0.0011 P8 GC+1d culture GAATAATACA 1.1 0.0011 P8 GC+1d culture GAATATTAAA 1.1 0.0011 P8 GC+1d culture GAGTAATAAA (2) 1.1 0.0011 P8 GC+1d culture GATCTGTGAC 1.1 0.0011 P8 GC+1d culture GTTCTGACAA 1.1 0.0011 P8 GC+SHH+1d culture GAATAATAAA 165.1 0.1651 P8 GC+SHH+1d culture CCTGGGGGAA 3.5 0.0035 P8 GC+SHH+1d culture GGAAAGGGTG (2) 2.3 0.0023 P8 GC+SHH+1d culture ACCAAGGACA 1.2 0.0012 P8 GC+SHH+1d culture CCCTGGGAGG 1.2 0.0012 P8 GC+SHH+1d culture GAGTAATAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCCTTTCAC 1.2 0.0012 3T3 fibroblasts GAATAATAAA 7 0.007 3T3 fibroblasts CCCTGGGAGG 3.5 0.0035 3T3 fibroblasts CCTGGGGGAA 3.5 0.0035 3T3 fibroblasts GATCTGTGAC 3.5 0.0035 E15 cortex CCTGGGGGAA 9.9 0.0099 E15 cortex GAATAATAAA 9.9 0.0099 E15 cortex GGATAATAAA 4.9 0.0049 P1 cortex GAATAATAAA 113.6 0.1136 P1 cortex CCTGGGGGAA 4.5 0.0045 P1 cortex GGAAAGGGTG (2) 4.5 0.0045 P1 cortex GGATAATAAA 4.5 0.0045 P1 cortex GTTCTGACAA 4.5 0.0045 Hypothalamus GAATAATAAA 193.8 0.1938 Hypothalamus TTGAAGGCAT 9.1 0.0091 Hypothalamus CCACCTGCAC 5.4 0.0054 Hypothalamus CCTGGGGGAA 3.6 0.0036 Hypothalamus CGCTCAATAT 3.6 0.0036 Hypothalamus GCCCTTTCAC 3.6 0.0036 Hypothalamus AAAGCAACTG 1.8 0.0018 Hypothalamus ACCAAGGACA 1.8 0.0018 Hypothalamus CACAATTACA 1.8 0.0018 Hypothalamus CCCTGGGAGG 1.8 0.0018 Hypothalamus GAAAGGTGGA 1.8 0.0018 Hypothalamus GAATATTAAA 1.8 0.0018 Hypothalamus GATCTGTGAC 1.8 0.0018 E12.5 retina GAATAATAAA 178.3 0.1783 E12.5 retina CCACCTGCAC 1.9 0.0019 E12.5 retina CCTGGGGGAA 1.9 0.0019 E12.5 retina CGCTCAATAT 1.9 0.0019 E12.5 retina GTTCTGACAA 1.9 0.0019 E12.5 retina TTGAAGGCAT 1.9 0.0019 E14.5 retina GAATAATAAA 180.4 0.1804 E14.5 retina TTGAAGGCAT 5.5 0.0055 E14.5 retina CCACCTGCAC 3.6 0.0036 E14.5 retina CCTGGGGGAA 3.6 0.0036 E14.5 retina GAATATTAAA 3.6 0.0036 E14.5 retina CGCTCAATAT 1.8 0.0018 E14.5 retina GATCTGTGAC 1.8 0.0018 E14.5 retina GCCCTTTCAC 1.8 0.0018 E14.5 retina GGAATAATAA 1.8 0.0018 E14.5 retina GTCCAAGAAG (2) 1.8 0.0018 E16.5 retina GAATAATAAA 99.6 0.0996 E16.5 retina TTGAAGGCAT 12.7 0.0127 E16.5 retina CCACCTGCAC 10.9 0.0109 E16.5 retina AAAGCAACTG 7.2 0.0072 E16.5 retina CCTGGGGGAA 3.6 0.0036 E16.5 retina ACCAAGGACA 1.8 0.0018 E16.5 retina CGCTCAATAT 1.8 0.0018 E16.5 retina GAATAATAAG 1.8 0.0018 E16.5 retina GATCTGTGAC 1.8 0.0018 E16.5 retina GGATAATAAA 1.8 0.0018 E16.5 retina GTCCAAGAAG (2) 1.8 0.0018 E18.5 retina GAATAATAAA 285.6 0.2856 E18.5 retina CCTGGGGGAA 3.6 0.0036 E18.5 retina CGCTCAATAT 3.6 0.0036 E18.5 retina TTGAAGGCAT 3.6 0.0036 E18.5 retina GAATAATACA 1.8 0.0018 E18.5 retina GAATATTAAA 1.8 0.0018 E18.5 retina GGATAATAAA 1.8 0.0018 P0.5 retina GAATAATAAA 51 0.051 P0.5 retina GATCTGTGAC 5.9 0.0059 P0.5 retina GGAAAGGGTG (2) 5.9 0.0059 P0.5 retina CCTGGGGGAA 3.9 0.0039 P2.5 retina GAATAATAAA 105.6 0.1056 P2.5 retina GGAAAGGGTG (2) 1.8 0.0018 P4.5 retina GAATAATAAA 190.2 0.1902 P4.5 retina AAAGCAACTG 4 0.004 P4.5 retina GGAATAATAA 2 0.002 P4.5 retina GGATAATAAA 2 0.002 P4.5 retina GTCCAAGAAG (2) 2 0.002 P4.5 retina TTGAAGGCAT 2 0.002 P6.5 retina GAATAATAAA 105 0.105 P6.5 retina CCACCTGCAC 3.3 0.0033 P6.5 retina CCTGGGGGAA 3.3 0.0033 P6.5 retina AAAGCAACTG 1.7 0.0017 P6.5 retina CGCTCAATAT 1.7 0.0017 P6.5 retina GAATATTAAA 1.7 0.0017 P6.5 retina GGAAAGGGTG (2) 1.7 0.0017 P10.5 crx- retina GAATAATAAA 102.2 0.1022 P10.5 crx- retina CCTGGGGGAA 7.4 0.0074 P10.5 crx- retina AAAGCAACTG 5.6 0.0056 P10.5 crx- retina CCACCTGCAC 3.7 0.0037 P10.5 crx- retina GGAAAGGGTG (2) 1.9 0.0019 P10.5 crx- retina GGAATAATAA 1.9 0.0019 P10.5 crx- retina TTGAAGGCAT 1.9 0.0019 P10.5 crx+ retina GAATAATAAA 48.1 0.0481 P10.5 crx+ retina TTGAAGGCAT 5.8 0.0058 P10.5 crx+ retina GCCCTTTCAC 3.8 0.0038 P10.5 crx+ retina CCCTGGGAGG 1.9 0.0019 P10.5 crx+ retina GAAAGGTGGA 1.9 0.0019 P10.5 crx+ retina GAATAATAAG 1.9 0.0019 Adult retinal GAATAATAAA 11.1 0.0111 Adult retinal GGAAAGGGTG (2) 1.9 0.0019 Adult retinal GGAATAATAA 1.9 0.0019 ONL GAATAATAAA 47.9 0.0479 ONL GAATATTAAA 3.8 0.0038 ONL TTGAAGGCAT 1.9 0.0019