Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.336743	Hspa8	heat shock protein 8	9	9 24.0 cM	15481
Gene Ontology	ATP binding | ATPase activity, coupled | chaperone activity | nucleus | protein binding | protein folding | regulation of cell cycle | response to heat | response to unfolded protein
Human Homolog	HSPA8[heat shock 70kDa protein 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 285 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCAGCTGC (2) ATGGTTTTCT ATTCTGACAA CACAATTACA CCACCTGCAC CGCTCAATAT GAAAGGTGGA GAAAGGTTGA GAATAATAAA GAATAATGAA GAATGATAAA GACCCCCCCC GAGATTAGCA GCCCTTTCAC GGATAATAAA GTCCAAGAAG (2) GTGGTGAATG TTACTTGTTT (2) TTGAAGGCAT 205.2 0.2052 Cb medulloblastoma ACCAAAAAAA (3) ACCAAGGACA ATGGTTTTCT CACAATTACA CCACCCTGGC CCACCTGCAC CCGGGGGAGT GAAAGGTTGA GAAGGTGGAA GAATAATAAA GAATAATAAG GAATAATAAT GACCCCCCCC GAGATTAGCA GGATAATAAA GGTGGGTGAA GTTCTGACAA TTGAAGGCAT 274.9 0.2749 P8 GC+1d culture AAAGCAACTG AAGCCTGTGG CCACCTGCAC CCTGGGGGAA CGCTCAATAT CTGAGTCAAG GAAAGGGTGG (2) GAAAGGTGGA GAAATAAATA (4) GAAATAATAA GAATAATAAA GAATAATACA GAATATTAAA GAATGATAAA GACCCCCCCC GAGTAATAAA (2) GATCTGTGAC GATTAATAAA (3) GGATAATAAA GTTCTGACAA GTTTTTAAAA (2) TGGGGGTCCC TTACTTGTTT (2) TTGAAGGCAT 193.6 0.1936 P8 GC+SHH+1d culture AAGCCTGTGG ACCAAAAAAA (3) ACCAAGGACA ATGGTTTTCT CCACCCTGGC CCCTGGGAGG CCTGGGGGAA CTGAGTCAAG GAAATAAATA (4) GAAATAATAA GAATAATAAA GAATAATGAA GACCCCCCCC GAGTAATAAA (2) GATTAATAAA (3) GCCCTTTCAC GGAAAGGGTG (2) GTTTTTAAAA (2) TGGGGGTCCC TTACTTGTTT (2) 204.9 0.2049 3T3 fibroblasts AACCAGCTGC (2) CCCTGGGAGG CCTGGGGGAA CTGAGTCAAG GAATAATAAA GATCTGTGAC 24.5 0.0245 E15 cortex CCTGGGGGAA GAATAATAAA GACCCCCCCC GGATAATAAA GTGGCGAATG 64.2 0.0642 P1 cortex ACCAAAAAAA (3) CCACCCTGGC CCTGGGGGAA GAATAATAAA GACCCCCCCC GGAAAGGGTG (2) GGATAATAAA GGTGGGTGAA GTTCTGACAA GTTTTTAAAA (2) TTACTTGTTT (2) 163.2 0.1632 Hypothalamus AAAGCAACTG AACCAGCTGC (2) ACCAAAAAAA (3) ACCAAGGACA CACAATTACA CCACCCTGGC CCACCTGCAC CCACCTGGAC (2) CCCTGGGAGG CCTGGGGGAA CGCTCAATAT CTGAGTCAAG GAAAGGTGGA GAAATAATAA GAATAATAAA GAATATTAAA GAATGATAAA GATCTGTGAC GCCCTTTCAC GTGGTGAATG GTTTTTAAAA (2) TTACTTGTTT (2) TTGAAGGCAT 300.4 0.3004 E12.5 retina AACCAGCTGC (2) CCACCTGCAC CCGGGGGAGT CCTGGGGGAA CGCTCAATAT GAAGGTGGAA GAATAATAAA GATTAATAAA (3) GTGGCGAATG GTTCTGACAA TTACTTGTTT (2) TTGAAGGCAT 201.1 0.2011 E14.5 retina AACCAGCTGC (2) ACCAAAAAAA (3) CAGTCTTGGT CCACCTGCAC CCACCTGGAC (2) CCTGGGGGAA CGCTCAATAT CTGAGTCAAG GAAAGGGTGG (2) GAATAATAAA GAATATTAAA GATCTGTGAC GCCCTTTCAC GGAATAATAA GTCCAAGAAG (2) GTGGCGAATG TGGGGGTCCC TTACTTGTTT (2) TTGAAGGCAT 236.7 0.2367 E16.5 retina AAAGCAACTG AACCAGCTGC (2) ACCAAAAAAA (3) ACCAAGGACA ATGGTTTTCT CCACCCTGGC CCACCTGCAC CCACCTGGAC (2) CCTGGGGGAA CGCTCAATAT CTGAGTCAAG GAAAGGGTGG (2) GAAATAATAA GAATAATAAA GAATAATAAG GAATAATAAT GATCTGTGAC GATTAATAAA (3) GGATAATAAA GTCCAAGAAG (2) GTGGTGAATG GTTTTTAAAA (2) TTACTTGTTT (2) TTGAAGGCAT 188.1 0.1881 E18.5 retina AAGCCTGTGG ACCAAAAAAA (3) ATGGTTTTCT CCTGGGGGAA CGCTCAATAT CTGAGTCAAG GAAATAAATA (4) GAATAATAAA GAATAATACA GAATAATGAA GAATATTAAA GAATGATAAA GACCCCCCCC GATTAATAAA (3) GGATAATAAA GTGGTGAATG TTACTTGTTT (2) TTGAAGGCAT 332.6 0.3326 P0.5 retina ACCAAAAAAA (3) ATTCTGACAA CCGGGGGAGT CCTGGGGGAA GAATAATAAA GATCTGTGAC GGAAAGGGTG (2) GTGGCGAATG GTGGTGAATG GTTTTTAAAA (2) TTACTTGTTT (2) 92.3 0.0923 P2.5 retina AACCAGCTGC (2) ATGGTTTTCT CCGGGGGAGT CTGAGTCAAG GAAATAATAA GAAGGTGGAA GAATAATAAA GGAAAGGGTG (2) GTGGCGAATG GTGGGTGGAA 123.5 0.1235 P4.5 retina AAAGCAACTG GAAATAATAA GAATAATAAA GAATAATAAT GATTAATAAA (3) GGAATAATAA GGATAATAAA GTCCAAGAAG (2) GTGGGTGGAA GTTTTTAAAA (2) TTACTTGTTT (2) TTGAAGGCAT 226.1 0.2261 P6.5 retina AAAGCAACTG ACCAAAAAAA (3) CCACCTGCAC CCTGGGGGAA CGCTCAATAT CTGAGTCAAG GAAGGTGGAA GAATAATAAA GAATATTAAA GATTAATAAA (3) GGAAAGGGTG (2) TTACTTGTTT (2) 135 0.135 P10.5 crx- retina AAAGCAACTG ATGGTTTTCT CCACCTGCAC CCTGGGGGAA CTGAGTCAAG GAAATAATAA GAATAATAAA GACCCCCCCC GGAAAGGGTG (2) GGAATAATAA TTACTTGTTT (2) TTGAAGGCAT 135.9 0.1359 P10.5 crx+ retina AACCAGCTGC (2) ACCAAAAAAA (3) CCCTGGGAGG GAAAGGTGGA GAAATAATAA GAATAATAAA GAATAATAAG GAGATTAGCA GCCCTTTCAC GTGGGTGGAA TTACTTGTTT (2) TTGAAGGCAT 78.6 0.0786 Adult retinal ACCAAAAAAA (3) CCGGGGGAGT GAATAATAAA GACCCCCCCC GAGATTAGCA GATTAATAAA (3) GGAAAGGGTG (2) GGAATAATAA GGTGGGTGAA 31.8 0.0318 ONL ACCAAAAAAA (3) ATTCTGACAA CAGTCTTGGT CTGAGTCAAG GAAATAATAA GAATAATAAA GAATATTAAA TTGAAGGCAT 65 0.065