Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3444	Brd2	bromodomain containing 2	17	17 C (17 18.53 cM)	14312
Gene Ontology	cytoplasm | nucleus | nucleus | protein serine/threonine kinase activity | spermatogenesis
Human Homolog	BRD2[bromodomain containing 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAATAAAGA (5) 26.1 0.0261 P8 Cb GC GGGAGGGAAG (2) 4.9 0.0049 P8 Cb GC AACAACTGGC 3.3 0.0033 Cb medulloblastoma TAAATAAAGA (5) 6.9 0.0069 Cb medulloblastoma GGGAGGGAAG (2) 4.6 0.0046 Cb medulloblastoma AACAACTGGC 2.3 0.0023 P8 GC+1d culture TAAATAAAGA (5) 25.1 0.0251 P8 GC+1d culture GGGAGGGAAG (2) 2.3 0.0023 P8 GC+1d culture GAAGCTGGAG (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAATAAAGA (5) 18.7 0.0187 P8 GC+SHH+1d culture GAAGCTGGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGAGGGAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TAAAATAAAG 1.2 0.0012 E15 cortex GACCTCAGCA (2) 9.9 0.0099 E15 cortex GGGAGGGAAG (2) 4.9 0.0049 P1 cortex TAAATAAAGA (5) 18.2 0.0182 P1 cortex GAAGCTGGAG (2) 9.1 0.0091 Hypothalamus GGGAGGGAAG (2) 10.9 0.0109 Hypothalamus TAAATAAAGA (5) 7.2 0.0072 Hypothalamus GACCTCAGCA (2) 1.8 0.0018 E12.5 retina TAAATAAAGA (5) 18.8 0.0188 E12.5 retina GGGAGGGAAG (2) 3.8 0.0038 E12.5 retina GAAGCTGGAG (2) 1.9 0.0019 E14.5 retina TAAATAAAGA (5) 18.2 0.0182 E14.5 retina AACAACTGGC 3.6 0.0036 E14.5 retina GAAGCTGGAG (2) 3.6 0.0036 E14.5 retina GGGAGGGAAG (2) 1.8 0.0018 E14.5 retina TAAAATAAAG 1.8 0.0018 E16.5 retina TAAATAAAGA (5) 21.7 0.0217 E16.5 retina GAAGCTGGAG (2) 1.8 0.0018 E16.5 retina GGGAGGGAAG (2) 1.8 0.0018 E18.5 retina TAAATAAAGA (5) 25.5 0.0255 E18.5 retina GGCTCAGCCT 5.5 0.0055 E18.5 retina TAAAATAAAG 1.8 0.0018 P0.5 retina GAAGCTGGAG (2) 2 0.002 P0.5 retina GGGAGGGAAG (2) 2 0.002 P0.5 retina TAAATAAAGA (5) 2 0.002 P2.5 retina TAAATAAAGA (5) 26.4 0.0264 P2.5 retina GGGAGGGAAG (2) 10.6 0.0106 P2.5 retina AACAACTGGC 5.3 0.0053 P2.5 retina TAAAATAAAG 1.8 0.0018 P4.5 retina TAAATAAAGA (5) 47.6 0.0476 P4.5 retina GGGAGGGAAG (2) 4 0.004 P4.5 retina AACAACTGGC 2 0.002 P4.5 retina GAAGCTGGAG (2) 2 0.002 P6.5 retina TAAATAAAGA (5) 36.7 0.0367 P6.5 retina GGGAGGGAAG (2) 3.3 0.0033 P6.5 retina AACAACTGGC 1.7 0.0017 P10.5 crx- retina TAAATAAAGA (5) 9.3 0.0093 P10.5 crx- retina GGGAGGGAAG (2) 3.7 0.0037 P10.5 crx- retina GAAGCTGGAG (2) 1.9 0.0019 P10.5 crx+ retina GGGAGGGAAG (2) 5.8 0.0058 P10.5 crx+ retina TAAATAAAGA (5) 3.8 0.0038 P10.5 crx+ retina AACAACTGGC 1.9 0.0019 P10.5 crx+ retina GAAGCTGGAG (2) 1.9 0.0019 Adult retinal AACAACTGGC 1.9 0.0019 Adult retinal GAAGCTGGAG (2) 1.9 0.0019 Adult retinal TAAATAAAGA (5) 1.9 0.0019 ONL TAAATAAAGA (5) 13.4 0.0134 ONL GGGAGGGAAG (2) 7.7 0.0077