Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.37214	Trf	transferrin	9	9 56.0 cM	22041
Gene Ontology	endocytic vesicle | extracellular | extracellular space | ferric iron binding | iron ion homeostasis | iron ion transport | transport
Human Homolog	TF[transferrin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 93 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCCACGGGA (2) 16.3 0.0163 P8 Cb GC CCCTGAGGGG 8.2 0.0082 P8 Cb GC CCCTGAGGGT (3) 1.6 0.0016 P8 Cb GC GTGGGTCTCA 1.6 0.0016 P8 Cb GC TGGCTTGCTC (3) 1.6 0.0016 P8 Cb GC TGGTTGCTCT (2) 1.6 0.0016 Cb medulloblastoma CCCTGAGGGG 20.8 0.0208 Cb medulloblastoma GAATGGAAAC 6.9 0.0069 Cb medulloblastoma GGCCACGGGA (2) 6.9 0.0069 Cb medulloblastoma CCCTGGAGGG 2.3 0.0023 Cb medulloblastoma TGGTTGCTCT (2) 2.3 0.0023 P8 GC+1d culture CCCTGAGGGG 14.8 0.0148 P8 GC+1d culture GTGGGTCTCA 5.7 0.0057 P8 GC+1d culture CCCTGAGGGT (3) 4.6 0.0046 P8 GC+1d culture TCACCGACAG 3.4 0.0034 P8 GC+1d culture GGCCACGGGA (2) 2.3 0.0023 P8 GC+1d culture AGGGAAGTGC (2) 1.1 0.0011 P8 GC+SHH+1d culture CCCTGAGGGG 7 0.007 P8 GC+SHH+1d culture CCCTGAGGGT (3) 3.5 0.0035 P8 GC+SHH+1d culture AGGGAAGTGC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGGTGTGGC (2) 1.2 0.0012 P8 GC+SHH+1d culture GAATGGAAAC 1.2 0.0012 P8 GC+SHH+1d culture GGCCACGGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTCTCA 1.2 0.0012 3T3 fibroblasts CCCTGAGGGT (3) 14 0.014 E15 cortex AGGGAAGTGC (2) 4.9 0.0049 E15 cortex CCCTGAGGGG 4.9 0.0049 E15 cortex TCACCGACAG 4.9 0.0049 E15 cortex TGGTTGCTCT (2) 4.9 0.0049 P1 cortex CCCTGAGGGT (3) 9.1 0.0091 P1 cortex AGGGAGAAAA 4.5 0.0045 P1 cortex GAATGGAAAC 4.5 0.0045 P1 cortex TGGTTGCTCT (2) 4.5 0.0045 Hypothalamus CCCTGAGGGG 9.1 0.0091 Hypothalamus CCCTGAGGGT (3) 3.6 0.0036 Hypothalamus TCACCGACAG 3.6 0.0036 Hypothalamus CTGGAGGGAG 1.8 0.0018 Hypothalamus CTGGTGTGGC (2) 1.8 0.0018 Hypothalamus GAATGGAAAC 1.8 0.0018 Hypothalamus GGCCACGGGA (2) 1.8 0.0018 E12.5 retina CCCTGAGGGG 1.9 0.0019 E12.5 retina CCCTGAGGGT (3) 1.9 0.0019 E12.5 retina GAATGGAAAC 1.9 0.0019 E12.5 retina TGGTTGCTCT (2) 1.9 0.0019 E14.5 retina TGGCTTGCTC (3) 3.6 0.0036 E14.5 retina AGGGAAGTGC (2) 1.8 0.0018 E14.5 retina CCCTGGAGGG 1.8 0.0018 E14.5 retina TCACCGACAG 1.8 0.0018 E14.5 retina TGGTTGCTCT (2) 1.8 0.0018 E16.5 retina AGGGAAGTGC (2) 1.8 0.0018 E16.5 retina CCCTGAGGGG 1.8 0.0018 E16.5 retina CCCTGAGGGT (3) 1.8 0.0018 E16.5 retina CCCTGGAGGG 1.8 0.0018 E16.5 retina CTGGAGGGAG 1.8 0.0018 E16.5 retina TCACCGACAG 1.8 0.0018 E16.5 retina TGGCTTGCTC (3) 1.8 0.0018 E16.5 retina TGGTTGCTCT (2) 1.8 0.0018 E18.5 retina TCACCGACAG 3.6 0.0036 E18.5 retina GTGGCTCGAA 1.8 0.0018 P0.5 retina CCCTGAGGGT (3) 2 0.002 P0.5 retina TGGTTGCTCT (2) 2 0.002 P2.5 retina AGGGAAGTGC (2) 3.5 0.0035 P2.5 retina CCCTGAGGGT (3) 3.5 0.0035 P2.5 retina CCCTGAGGGG 1.8 0.0018 P2.5 retina CTGGAGGGAG 1.8 0.0018 P2.5 retina GTGGCTCGAA 1.8 0.0018 P2.5 retina TCACCGACAG 1.8 0.0018 P4.5 retina CCCTGAGGGT (3) 4 0.004 P4.5 retina TGGTTGCTCT (2) 4 0.004 P4.5 retina TGGCTTGCTC (3) 2 0.002 P6.5 retina CCCTGAGGGT (3) 3.3 0.0033 P6.5 retina CCCTGAGGGG 1.7 0.0017 P6.5 retina GAATGGAAAC 1.7 0.0017 P10.5 crx- retina CCCTGAGGGG 7.4 0.0074 P10.5 crx- retina CCCTGAGGGT (3) 7.4 0.0074 P10.5 crx- retina AGGGAGAAAA 1.9 0.0019 P10.5 crx- retina CTGGTGTGGC (2) 1.9 0.0019 P10.5 crx- retina TGGCTTGCTC (3) 1.9 0.0019 P10.5 crx- retina TGGTTGCTCT (2) 1.9 0.0019 P10.5 crx+ retina CCCTGAGGGG 3.8 0.0038 P10.5 crx+ retina CCCTGAGGGT (3) 3.8 0.0038 P10.5 crx+ retina GGCCACGGGA (2) 3.8 0.0038 P10.5 crx+ retina GAATGGAAAC 1.9 0.0019 P10.5 crx+ retina GTGGCTCGAA 1.9 0.0019 P10.5 crx+ retina TGGTTGCTCT (2) 1.9 0.0019 Adult retinal CCCTGAGGGT (3) 9.3 0.0093 Adult retinal AGGGAAGTGC (2) 3.7 0.0037 Adult retinal TCACCGACAG 3.7 0.0037 Adult retinal CCCTGAGGGG 1.9 0.0019 Adult retinal GGCCACGGGA (2) 1.9 0.0019 ONL CCCTGAGGGG 3.8 0.0038 ONL CCCTGAGGGT (3) 1.9 0.0019 ONL GTGGGTCTCA 1.9 0.0019