Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.3973
Stx8
syntaxin 8
11
55943
Mm.3973
Ntn1
netrin 1
11
18208
Mm.3973
C78197
expressed sequence C78197
11
97702
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 33 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGGGCCCAC
(
3
)
6.5
0.0065
P8 Cb GC
ATAGAACTAA
(
3
)
4.9
0.0049
Cb medulloblastoma
ATAGAACTAA
(
3
)
9.2
0.0092
Cb medulloblastoma
TAGGGCCCAC
(
3
)
6.9
0.0069
Cb medulloblastoma
GTGATTTTAT
(
3
)
4.6
0.0046
Cb medulloblastoma
ATGTGATTGC
(
4
)
2.3
0.0023
Cb medulloblastoma
GCCCCGGACC
(
3
)
2.3
0.0023
P8 GC+1d culture
TAGGGCCCAC
(
3
)
8
0.008
P8 GC+1d culture
ATAGAACTAA
(
3
)
6.8
0.0068
P8 GC+1d culture
GTGATTTTAT
(
3
)
3.4
0.0034
P8 GC+1d culture
GCCATCTGAG
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
ATAGAACTAA
(
3
)
7
0.007
P8 GC+SHH+1d culture
TAGGGCCCAC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
GTGATTTTAT
(
3
)
1.2
0.0012
3T3 fibroblasts
TAGGGCCCAC
(
3
)
3.5
0.0035
P1 cortex
GTGATTTTAT
(
3
)
4.5
0.0045
E12.5 retina
ATGTGATTGC
(
4
)
1.9
0.0019
E16.5 retina
GCCATCTGAG
(
4
)
1.8
0.0018
E16.5 retina
GCCCCGGACC
(
3
)
1.8
0.0018
E18.5 retina
GCCATCTGAG
(
4
)
3.6
0.0036
E18.5 retina
ATGTGATTGC
(
4
)
1.8
0.0018
P4.5 retina
GTGATTTTAT
(
3
)
4
0.004
P4.5 retina
GCCATCTGAG
(
4
)
2
0.002
P6.5 retina
GCCATCTGAG
(
4
)
1.7
0.0017
P6.5 retina
GTGATTTTAT
(
3
)
1.7
0.0017
P10.5 crx- retina
ATGTGATTGC
(
4
)
1.9
0.0019
P10.5 crx- retina
GTGATTTTAT
(
3
)
1.9
0.0019
P10.5 crx+ retina
ATGTGATTGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GTGATTTTAT
(
3
)
1.9
0.0019
Adult retinal
GCCATCTGAG
(
4
)
1.9
0.0019
Adult retinal
GTGATTTTAT
(
3
)
1.9
0.0019
ONL
GCCATCTGAG
(
4
)
1.9
0.0019
ONL
GCCCCGGACC
(
3
)
1.9
0.0019
