Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.40546	AI839402	expressed sequence AI839402	16		106263
Mm.40546	Itsn1	intersectin 1 (SH3 domain protein 1A)	16		16443
Gene Ontology	calcium ion binding | endocytosis | lamellipodium | protein binding | small GTPase mediated signal transduction
Human Homolog	ITSN1[intersectin 1 (SH3 domain protein)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATATGAATG (2) 1.6 0.0016 P8 Cb GC TGATCGAAAT (2) 1.6 0.0016 Cb medulloblastoma GCTTCTAGAG (2) 2.3 0.0023 P8 GC+1d culture TGATCGAAAT (2) 2.3 0.0023 P8 GC+1d culture GATATGAATG (2) 1.1 0.0011 P8 GC+1d culture GCTTCTAGAG (2) 1.1 0.0011 P8 GC+SHH+1d culture GATATGAATG (2) 3.5 0.0035 P8 GC+SHH+1d culture CATTTAACTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGTGGTTTG (5) 1.2 0.0012 P1 cortex CATTTAACTG (2) 4.5 0.0045 P1 cortex TGATCGAAAT (2) 4.5 0.0045 Hypothalamus TCACATCCAA (2) 5.4 0.0054 E12.5 retina GAAAGAGCAA (2) 3.8 0.0038 E12.5 retina GATATGAATG (2) 3.8 0.0038 E12.5 retina GCTTCTAGAG (2) 1.9 0.0019 E14.5 retina GATATGAATG (2) 5.5 0.0055 E14.5 retina GAAAGAGCAA (2) 3.6 0.0036 E14.5 retina CGCGACAGGT (3) 1.8 0.0018 E14.5 retina TGGTGGTTTG (5) 1.8 0.0018 E16.5 retina GATATGAATG (2) 3.6 0.0036 E16.5 retina TGGTGGTTTG (5) 1.8 0.0018 E18.5 retina GAAAGAGCAA (2) 1.8 0.0018 E18.5 retina TGGTGGTTTG (5) 1.8 0.0018 P0.5 retina TGGTGGTTTG (5) 2 0.002 P2.5 retina GATATGAATG (2) 3.5 0.0035 P2.5 retina TCACATCCAA (2) 1.8 0.0018 P2.5 retina TGGTGGTTTG (5) 1.8 0.0018 P4.5 retina GATATGAATG (2) 4 0.004 P6.5 retina GATATGAATG (2) 5 0.005 P6.5 retina TCACATCCAA (2) 1.7 0.0017 Adult retinal CGCGACAGGT (3) 3.7 0.0037 Adult retinal TGGTGGTTTG (5) 3.7 0.0037 Adult retinal CATTTAACTG (2) 1.9 0.0019 Adult retinal GAAAGAGCAA (2) 1.9 0.0019 ONL GAAAGAGCAA (2) 19.2 0.0192 ONL GATATGAATG (2) 1.9 0.0019