Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4266	AI646531	expressed sequence AI646531	14		105546
Mm.4266	Itm2b	integral membrane protein 2B	14	14 32.5 cM	16432
Gene Ontology	ATP binding | biological_process unknown | integral to membrane | membrane fraction
Human Homolog	ITM2B[integral membrane protein 2B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 103 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAGTAGCAA (2) 57.1 0.0571 P8 Cb GC CAGTTATAAA (5) 31 0.031 P8 Cb GC TTACTAATTT (2) 24.5 0.0245 P8 Cb GC GTGAAGGTGA (3) 3.3 0.0033 P8 Cb GC AAAAGAAGAT (4) 1.6 0.0016 P8 Cb GC AGGGAAAGAA (2) 1.6 0.0016 Cb medulloblastoma TTACTAATTT (2) 97.1 0.0971 Cb medulloblastoma CAGTTATAAA (5) 94.8 0.0948 Cb medulloblastoma TAAGTAGCAA (2) 64.7 0.0647 Cb medulloblastoma GAAGTGCAGA (2) 4.6 0.0046 Cb medulloblastoma AGGGAAAGAA (2) 2.3 0.0023 Cb medulloblastoma AGTTGCTTCT (2) 2.3 0.0023 Cb medulloblastoma GTGATCACCG (2) 2.3 0.0023 P8 GC+1d culture TAAGTAGCAA (2) 132.4 0.1324 P8 GC+1d culture TTACTAATTT (2) 55.9 0.0559 P8 GC+1d culture CAGTTATAAA (5) 40 0.04 P8 GC+1d culture GTGAAGGTGA (3) 4.6 0.0046 P8 GC+1d culture AGGGAAAGAT (2) 2.3 0.0023 P8 GC+1d culture AGTTGCTTCT (2) 1.1 0.0011 P8 GC+1d culture GAAGTGCAGA (2) 1.1 0.0011 P8 GC+1d culture GTGATCACCG (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAGTAGCAA (2) 79.6 0.0796 P8 GC+SHH+1d culture CAGTTATAAA (5) 35.1 0.0351 P8 GC+SHH+1d culture TTACTAATTT (2) 23.4 0.0234 P8 GC+SHH+1d culture AAAAGAAGAT (4) 1.2 0.0012 P8 GC+SHH+1d culture AGTTGCTTCT (2) 1.2 0.0012 P8 GC+SHH+1d culture GAAGTGCAGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGAAGGTGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGATCACCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTAACTAAT (2) 1.2 0.0012 3T3 fibroblasts TAAGTAGCAA (2) 7 0.007 3T3 fibroblasts GTGAAGGTGA (3) 3.5 0.0035 3T3 fibroblasts TTACTAATTT (2) 3.5 0.0035 E15 cortex GTGATCACCG (2) 9.9 0.0099 E15 cortex AGGGAAAGAA (2) 4.9 0.0049 P1 cortex TAAGTAGCAA (2) 13.6 0.0136 P1 cortex CAGTTATAAA (5) 9.1 0.0091 P1 cortex TTACTAATTT (2) 4.5 0.0045 Hypothalamus TAAGTAGCAA (2) 58 0.058 Hypothalamus CAGTTATAAA (5) 43.5 0.0435 Hypothalamus TTACTAATTT (2) 32.6 0.0326 Hypothalamus AGTTGCTTCT (2) 5.4 0.0054 Hypothalamus GAAGTGCAGA (2) 3.6 0.0036 Hypothalamus GTGAAGGTGA (3) 3.6 0.0036 Hypothalamus GTTAACTAAT (2) 1.8 0.0018 E12.5 retina TAAGTAGCAA (2) 7.5 0.0075 E12.5 retina CAGTTATAAA (5) 3.8 0.0038 E12.5 retina GAAGAGAACA (2) 1.9 0.0019 E12.5 retina GTGAAGGTGA (3) 1.9 0.0019 E12.5 retina GTTAACTAAT (2) 1.9 0.0019 E14.5 retina TAAGTAGCAA (2) 10.9 0.0109 E14.5 retina TTACTAATTT (2) 5.5 0.0055 E14.5 retina GTTAACTAAT (2) 1.8 0.0018 E16.5 retina TAAGTAGCAA (2) 9.1 0.0091 E16.5 retina TTACTAATTT (2) 9.1 0.0091 E16.5 retina AGTTGCTTCT (2) 1.8 0.0018 E16.5 retina CAGTTATAAA (5) 1.8 0.0018 E16.5 retina GTGAAGGTGA (3) 1.8 0.0018 E16.5 retina GTTAACTAAT (2) 1.8 0.0018 E18.5 retina TAAGTAGCAA (2) 18.2 0.0182 E18.5 retina CAGTTATAAA (5) 14.6 0.0146 E18.5 retina TTACTAATTT (2) 9.1 0.0091 E18.5 retina GAAGAGAACA (2) 1.8 0.0018 E18.5 retina GTGATCACCG (2) 1.8 0.0018 P0.5 retina TAAGTAGCAA (2) 13.7 0.0137 P0.5 retina CAGTTATAAA (5) 3.9 0.0039 P0.5 retina TTACTAATTT (2) 3.9 0.0039 P0.5 retina AGGGAAAGAT (2) 2 0.002 P0.5 retina GTGAAGGTGA (3) 2 0.002 P2.5 retina TAAGTAGCAA (2) 19.4 0.0194 P2.5 retina CAGTTATAAA (5) 10.6 0.0106 P2.5 retina TTACTAATTT (2) 5.3 0.0053 P2.5 retina GTGAAGGTGA (3) 1.8 0.0018 P4.5 retina CAGTTATAAA (5) 9.9 0.0099 P4.5 retina TAAGTAGCAA (2) 9.9 0.0099 P4.5 retina TTACTAATTT (2) 9.9 0.0099 P4.5 retina AAAAGAAGAT (4) 2 0.002 P4.5 retina GTGAAGGTGA (3) 2 0.002 P6.5 retina CAGTTATAAA (5) 20 0.02 P6.5 retina TAAGTAGCAA (2) 18.3 0.0183 P6.5 retina TTACTAATTT (2) 10 0.01 P6.5 retina GTGAAGGTGA (3) 3.3 0.0033 P6.5 retina GTGATCACCG (2) 1.7 0.0017 P10.5 crx- retina TAAGTAGCAA (2) 50.2 0.0502 P10.5 crx- retina CAGTTATAAA (5) 11.1 0.0111 P10.5 crx- retina TTACTAATTT (2) 5.6 0.0056 P10.5 crx- retina GAAGTGCAGA (2) 3.7 0.0037 P10.5 crx- retina GTGATCACCG (2) 3.7 0.0037 P10.5 crx- retina AGGGAAAGAT (2) 1.9 0.0019 P10.5 crx- retina GTGAAGGTGA (3) 1.9 0.0019 P10.5 crx+ retina TAAGTAGCAA (2) 26.9 0.0269 P10.5 crx+ retina CAGTTATAAA (5) 11.5 0.0115 P10.5 crx+ retina TTACTAATTT (2) 7.7 0.0077 P10.5 crx+ retina GAAGTGCAGA (2) 1.9 0.0019 Adult retinal TAAGTAGCAA (2) 18.5 0.0185 Adult retinal TTACTAATTT (2) 13 0.013 Adult retinal CAGTTATAAA (5) 11.1 0.0111 Adult retinal GAAGTGCAGA (2) 1.9 0.0019 ONL TAAGTAGCAA (2) 19.2 0.0192 ONL CAGTTATAAA (5) 7.7 0.0077 ONL TTACTAATTT (2) 3.8 0.0038 ONL GAAGAGAACA (2) 1.9 0.0019 ONL GAAGTGCAGA (2) 1.9 0.0019