Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.6343	Npm1	nucleophosmin 1	11		18148
Gene Ontology	nucleic acid binding | nucleolus | nucleus | protein binding | RNA binding
Human Homolog	NPM1[nucleophosmin (nucleolar phosphoprotein B23, numatrin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 76 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAATAAAC 53.8 0.0538 P8 Cb GC TTTTAACCTT (3) 14.7 0.0147 P8 Cb GC GGAAAATACA 1.6 0.0016 P8 Cb GC TCTGGAAAGC (3) 1.6 0.0016 Cb medulloblastoma TGAAATAAAC 34.7 0.0347 Cb medulloblastoma CAAGGGCAAA (5) 2.3 0.0023 P8 GC+1d culture TGAAATAAAC 29.7 0.0297 P8 GC+1d culture TTTTAACCTT (3) 4.6 0.0046 P8 GC+1d culture TCTGGAAAGC (3) 3.4 0.0034 P8 GC+1d culture CAAGGGCAAA (5) 2.3 0.0023 P8 GC+1d culture TAAATAAACT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGAAATAAAC 65.6 0.0656 P8 GC+SHH+1d culture TTTTAACCTT (3) 10.5 0.0105 P8 GC+SHH+1d culture CAAGGGCAAA (5) 5.9 0.0059 P8 GC+SHH+1d culture TAAATAAACT (2) 2.3 0.0023 P8 GC+SHH+1d culture TATATTTGTC 2.3 0.0023 3T3 fibroblasts TCTGGAAAGC (3) 10.5 0.0105 3T3 fibroblasts TGAAATAAAC 7 0.007 3T3 fibroblasts TTTTAACCTT (3) 3.5 0.0035 E15 cortex TCTGGAAAGC (3) 14.8 0.0148 E15 cortex TGAAATAAAC 9.9 0.0099 E15 cortex CAAGGGCAAA (5) 4.9 0.0049 P1 cortex TGAAATAAAC 22.7 0.0227 P1 cortex TGAAATAAAT (2) 18.2 0.0182 Hypothalamus TGAAATAAAC 36.2 0.0362 Hypothalamus TATATTTGTC 1.8 0.0018 Hypothalamus TGAAATAAAT (2) 1.8 0.0018 Hypothalamus TTTTAACCTT (3) 1.8 0.0018 E12.5 retina TGAAATAAAC 101.4 0.1014 E12.5 retina TTTTAACCTT (3) 11.3 0.0113 E12.5 retina TATATTTGTC 1.9 0.0019 E12.5 retina TCTGGAAAGC (3) 1.9 0.0019 E14.5 retina TGAAATAAAC 60.1 0.0601 E14.5 retina TTTTAACCTT (3) 14.6 0.0146 E14.5 retina TATATTTGTC 5.5 0.0055 E14.5 retina CAAGGGCAAA (5) 1.8 0.0018 E14.5 retina GGAAAATACA 1.8 0.0018 E16.5 retina TGAAATAAAC 45.3 0.0453 E16.5 retina TTTTAACCTT (3) 10.9 0.0109 E16.5 retina TATATTTGTC 9.1 0.0091 E16.5 retina CAAGGGCAAA (5) 3.6 0.0036 E16.5 retina TCTGGAAAGC (3) 3.6 0.0036 E18.5 retina TGAAATAAAC 118.2 0.1182 E18.5 retina TTTTAACCTT (3) 16.4 0.0164 E18.5 retina TATATTTGTC 5.5 0.0055 E18.5 retina GGAAAATACA 1.8 0.0018 P0.5 retina TGAAATAAAC 25.5 0.0255 P0.5 retina CAAGGGCAAA (5) 7.9 0.0079 P0.5 retina TTTTAACCTT (3) 7.9 0.0079 P0.5 retina TCTGGAAAGC (3) 2 0.002 P2.5 retina TGAAATAAAC 47.5 0.0475 P2.5 retina CAAGGGCAAA (5) 8.8 0.0088 P2.5 retina TATATTTGTC 5.3 0.0053 P2.5 retina TTTTAACCTT (3) 5.3 0.0053 P2.5 retina GGAAAATACA 1.8 0.0018 P2.5 retina TGAAATAAAT (2) 1.8 0.0018 P4.5 retina TGAAATAAAC 55.5 0.0555 P4.5 retina CAAGGGCAAA (5) 2 0.002 P4.5 retina TATATTTGTC 2 0.002 P4.5 retina TTTTAACCTT (3) 2 0.002 P6.5 retina TGAAATAAAC 15 0.015 P6.5 retina TTTTAACCTT (3) 6.7 0.0067 P6.5 retina CAAGGGCAAA (5) 5 0.005 P6.5 retina GGAAAATACA 1.7 0.0017 P10.5 crx- retina TGAAATAAAC 7.4 0.0074 P10.5 crx- retina CAAGGGCAAA (5) 5.6 0.0056 P10.5 crx- retina TATATTTGTC 1.9 0.0019 P10.5 crx- retina TTTTAACCTT (3) 1.9 0.0019 P10.5 crx+ retina TGAAATAAAC 7.7 0.0077 P10.5 crx+ retina GGAAAATACA 1.9 0.0019 P10.5 crx+ retina TTTTAACCTT (3) 1.9 0.0019 Adult retinal TGAAATAAAC 5.6 0.0056 Adult retinal TCTGGAAAGC (3) 1.9 0.0019 ONL TGAAATAAAC 13.4 0.0134 ONL CAAGGGCAAA (5) 1.9 0.0019 ONL TGAAATAAAT (2) 1.9 0.0019