Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.65979	5730526G10Rik	RIKEN cDNA 5730526G10 gene	12		70656
Mm.65979	Strn3	striatin, calmodulin binding protein 3	12		94186
Gene Ontology	calmodulin binding
Human Homolog	STRN3[striatin, calmodulin binding protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGATCTGCCT (5) 3.3 0.0033 P8 Cb GC ATTAAGACAA (2) 1.6 0.0016 Cb medulloblastoma TGATCTGCCT (5) 9.2 0.0092 Cb medulloblastoma ATTAAGACAA (2) 6.9 0.0069 Cb medulloblastoma GTGTAGATGC (2) 4.6 0.0046 P8 GC+1d culture ATTAAGACAA (2) 2.3 0.0023 P8 GC+1d culture GTAAATCAAG (2) 1.1 0.0011 P8 GC+1d culture TGATCTGCCT (5) 1.1 0.0011 P8 GC+SHH+1d culture ATTAAGACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture ATTCCAAAAC (2) 1.2 0.0012 3T3 fibroblasts GTGTAGATGC (2) 24.5 0.0245 3T3 fibroblasts TGATCTGCCT (5) 17.5 0.0175 E15 cortex TGATCTGCCT (5) 19.8 0.0198 P1 cortex ATTAAGACAA (2) 9.1 0.0091 P1 cortex GTGTAGATGC (2) 4.5 0.0045 Hypothalamus TGATCTGCCT (5) 3.6 0.0036 E12.5 retina TGATCTGCCT (5) 3.8 0.0038 E12.5 retina AAGGTGCAAG (2) 1.9 0.0019 E12.5 retina CATTACACAA (3) 1.9 0.0019 E14.5 retina ATTAAGACAA (2) 3.6 0.0036 E14.5 retina ATTCCAAAAC (2) 1.8 0.0018 E16.5 retina GTGTAGATGC (2) 1.8 0.0018 E16.5 retina TGATCTGCCT (5) 1.8 0.0018 E18.5 retina ATTAAGACAA (2) 3.6 0.0036 E18.5 retina AAGGTGCAAG (2) 1.8 0.0018 E18.5 retina TGATCTGCCT (5) 1.8 0.0018 P0.5 retina TGATCTGCCT (5) 3.9 0.0039 P0.5 retina ATTAAGACAA (2) 2 0.002 P2.5 retina TGATCTGCCT (5) 1.8 0.0018 P4.5 retina ATTAAGACAA (2) 2 0.002 P4.5 retina CATTACACAA (3) 2 0.002 P6.5 retina ATTAAGACAA (2) 8.3 0.0083 P6.5 retina TGATCTGCCT (5) 5 0.005 P6.5 retina GTGTAGATGC (2) 1.7 0.0017 P10.5 crx- retina TGATCTGCCT (5) 5.6 0.0056 P10.5 crx- retina ATTCCAAAAC (2) 1.9 0.0019 Adult retinal AAGGTGCAAG (2) 1.9 0.0019 Adult retinal GTGTAGATGC (2) 1.9 0.0019 ONL GTAAATCAAG (2) 1.9 0.0019