Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.100113	Rnu70	RNA, U70 small nucleolar			104368
Mm.100113	Rpl10	ribosomal protein 10	X	X 29.82 cM	110954
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL10[ribosomal protein L10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 226 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATCTTTTTC (2) ATGACAATAG (2) CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GGCCGCCGCC (2) GGCCGCCGGC GTTGCTGAGA (2) GTTGTTGAGA GTTTGCCTGA (3) TCATCCGTAT (2) TCCATCCGAA (2) TGATTGAGGC (2) 146.6 0.1466 Cb medulloblastoma ATGTTGTCAC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTGCTGAGA (2) GTTGTTGAGA TGCCTTGTCC 110.9 0.1109 P8 GC+1d culture AATCTTTTTC (2) ATGACAATAG (2) ATGTTGTCAC CCTTTAATCC (3) GAAAGGGTGG (2) GACACCAGAG (2) GGCCCCGCCC (3) GTTGCTGAGA (2) GTTGCTGGAA GTTTGCCTGA (3) TATTTGTTGG (2) TCATCCGTAT (2) TCCATCCGAA (2) TCTTCAAATT TGCCTTGTCC TTTTCAAATT 144.8 0.1448 P8 GC+SHH+1d culture AATCTTTTTC (2) ATGACAATAG (2) ATGTTGTCAC CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTGCTGAGA (2) GTTGCTGGAA TATTTGTTGG (2) TCTTCAAATT TGCCTTGTCC 156.9 0.1569 3T3 fibroblasts CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTGCTGAGA (2) GTTTGCCTGA (3) TGCCTTGTCC 252.3 0.2523 E15 cortex CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTCCTGAAA GTTGCTGAGA (2) GTTTGCCTGA (3) 232.4 0.2324 P1 cortex CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GTTGCTGAGA (2) GTTTGCCTGA (3) TGCCTTGTCC 290.8 0.2908 Hypothalamus CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTCCTGAAA GTTGCTGAAA (2) GTTGCTGAGA (2) GTTGCTGGAA TATTTGTTGG (2) TCATCCGTAT (2) TCTTCAAATT TGATTGAGGC (2) 117.6 0.1176 E12.5 retina ATGACAATAG (2) CCTGACTGGC CCTTTAATCC (3) GGCCCCGCCC (3) GGCCGCCGCC (2) GGTGCTGAGA GTTGCTGAAA (2) GTTGCTGAGA (2) GTTGCTGGAA TATTTGTTGG (2) TGCCTTGTCC 277.9 0.2779 E14.5 retina AATCTTTTTC (2) ATGTTGTCAC CCTGACTGGC CCTTTAATCC (3) GAAAGGGTGG (2) GACACCAGAG (2) GTTGCTGAGA (2) GTTTGCCTGA (3) TATTTGTTGG (2) TCATCCGTAT (2) TCCATCCGAA (2) TCTTCAAATT TGATTGAGGC (2) TTCCTTGTTC (3) TTTTCAAATT 245.8 0.2458 E16.5 retina AATCTTTTTC (2) ATGACAATAG (2) ATGTTGTCAC CCTGACTGGC CCTTTAATCC (3) GAAAGGGTGG (2) GACACCAGAG (2) GGCCCCGCCC (3) GGTGCTGAGA GTAAAGAGTT (2) GTTGCTGAGA (2) TATTTGTTGG (2) TCATCCGTAT (2) TGATTGAGGC (2) TGCCTTGTCC TTCCTTGTTC (3) TTTTCAAATT 182.6 0.1826 E18.5 retina ATGACAATAG (2) CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GGCCGCCGGC GTTGCTGAAA (2) GTTGCTGAGA (2) GTTTGCCTGA (3) TCTTCAAATT TTCCTTGTTC (3) 127.1 0.1271 P0.5 retina ATGACAATAG (2) ATGTTGTCAC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GGTGCTGAGA GTTGCTGAAA (2) GTTGCTGAGA (2) GTTGCTGGAA GTTGTTGAGA GTTTGCCTGA (3) TGATTGAGGC (2) TTCCTTGTTC (3) TTTTCAAATT 196.5 0.1965 P2.5 retina AATCTTTTTC (2) ATGACAATAG (2) CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GGTGCTGAGA GTTGCTGAGA (2) GTTGCTGGAA GTTGTTGAGA GTTTGCCTGA (3) TGATTGAGGC (2) TTCCTTGTTC (3) 155.2 0.1552 P4.5 retina AATCTTTTTC (2) ATGTTGTCAC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GGCCGCCGGC GTTCCTGAAA GTTGCTGAAA (2) GTTGCTGAGA (2) GTTTGCCTGA (3) TATTTGTTGG (2) TGCCTTGTCC TTCCTTGTTC (3) 130.9 0.1309 P6.5 retina AATCTTTTTC (2) ATGACAATAG (2) CCTTTAATCC (3) GACACCAGAG (2) GGTGCTGAGA GTTCCTGAAA GTTGCTGAAA (2) GTTGCTGAGA (2) GTTGTTGAGA TATTTGTTGG (2) TCTTCAAATT TGCCTTGTCC TTCCTTGTTC (3) TTTTCAAATT 148.5 0.1485 P10.5 crx- retina AATCTTTTTC (2) ATGTTGTCAC CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTGCTGAAA (2) GTTGCTGAGA (2) GTTTGCCTGA (3) TATTTGTTGG (2) TCATCCGTAT (2) TGATTGAGGC (2) TTTTCAAATT 147.2 0.1472 P10.5 crx+ retina ATGACAATAG (2) ATGTTGTCAC CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCCCGCCC (3) GTTGCTGAAA (2) GTTGCTGAGA (2) GTTGTTGAGA GTTTGCCTGA (3) TGCCTTGTCC TTTTCAAATT 118.8 0.1188 Adult retinal CCTGACTGGC CCTTTAATCC (3) GACACCAGAG (2) GGCCGCCGGC GTTGCTGAGA (2) TATTTGTTGG (2) TTCCTTGTTC (3) 168.7 0.1687 ONL ATGACAATAG (2) CCTTTAATCC (3) GTTGCTGAAA (2) GTTGCTGAGA (2) TGATTGAGGC (2) TGCCTTGTCC TTTTCAAATT 105.3 0.1053