| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) TAAGAAAAGG (2) TGAGACAAGG (2)
| 212 | 0.212 |
| Cb medulloblastoma | AAAAAAAAAA (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 809.3 | 0.8093 |
| P8 GC+1d culture | AAAAAAAAAA (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 212.3 | 0.2123 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) ACAGTTAAGT (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 283.4 | 0.2834 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 45.5 | 0.0455 |
| E15 cortex | AAAAAAAAAA (2) GGCCCCTCCC (2) TAAGAAAAGG (2)
| 232.5 | 0.2325 |
| P1 cortex | AAAAAAAAAA (2) CCCCTAATTT (3) GGCCCCTCCC (2)
| 277.2 | 0.2772 |
| Hypothalamus | AAAAAAAAAA (2) CCCCTAATTT (3) TGAGACAAGG (2)
| 130.4 | 0.1304 |
| E12.5 retina | AAAAAAAAAA (2) TGAGACAAGG (2)
| 142.7 | 0.1427 |
| E14.5 retina | AAAAAAAAAA (2) TGAGACAAGG (2)
| 98.3 | 0.0983 |
| E16.5 retina | AAAAAAAAAA (2) ACAGTTAAGT (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 56.1 | 0.0561 |
| E18.5 retina | AAAAAAAAAA (2) GGCCCCTCCC (2) TAAGAAAAGG (2) TGAGACAAGG (2)
| 389.2 | 0.3892 |
| P0.5 retina | AAAAAAAAAA (2) AGGGAGTCAG (3) GGCCCCTCCC (2) TAAGAAAAGG (2) TGAGACAAGG (2)
| 131.6 | 0.1316 |
| P2.5 retina | AAAAAAAAAA (2) CCCCTAATTT (3) GGCCCCTCCC (2) TGAGACAAGG (2)
| 341.5 | 0.3415 |
| P4.5 retina | AAAAAAAAAA (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 289.3 | 0.2893 |
| P6.5 retina | AAAAAAAAAA (2) AGGGAGTCAG (3) CCCCTAATTT (3) GGCCCCTCCC (2) TGAGACAAGG (2)
| 275.2 | 0.2752 |
| P10.5 crx- retina | AAAAAAAAAA (2) ACAGTTAAGT (2) GGCCCCTCCC (2) TGAGACAAGG (2)
| 54 | 0.054 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CCCCTAATTT (3) GGCCCCTCCC (2) TGAGACAAGG (2)
| 101.8 | 0.1018 |
| Adult retinal | AAAAAAAAAA (2) CCCCTAATTT (3)
| 61.1 | 0.0611 |
| ONL | AAAAAAAAAA (2) CCCCTAATTT (3)
| 111.1 | 0.1111 |