| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAAAGTTTTT (2) TAAGAATAAA (3) TTATTTATTA (4)
| 8.1 | 0.0081 |
| Cb medulloblastoma | TAAAGTTTTT (2) TAAGAATAAA (3)
| 9.2 | 0.0092 |
| P8 GC+1d culture | TAAAGTTTTT (2) TAAGAATAAA (3) TTATTTATTA (4)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | TAAAGTTTTT (2) TAAGAATAAA (3) TACACATACA TTATTTATTA (4)
| 11.8 | 0.0118 |
| 3T3 fibroblasts | GTCATAGCTG (2)
| 10.5 | 0.0105 |
| E15 cortex | GTCATAGCTG (2) TAAAGTTTTT (2)
| 9.8 | 0.0098 |
| P1 cortex | TAAGAATAAA (3)
| 4.5 | 0.0045 |
| Hypothalamus | TAAGAATAAA (3) TTATTTATTA (4)
| 14.5 | 0.0145 |
| E12.5 retina | TAAGAATAAA (3)
| 1.9 | 0.0019 |
| E14.5 retina | TAAAGTTTTT (2) TTATTTATTA (4)
| 16.4 | 0.0164 |
| E16.5 retina | ATTACGCCAA TAAAGTTTTT (2)
| 7.2 | 0.0072 |
| E18.5 retina | TAAAGTTTTT (2) TAAGAATAAA (3)
| 5.4 | 0.0054 |
| P0.5 retina | ATTACGCCAA GTCATAGCTG (2) TAAAGTTTTT (2)
| 13.8 | 0.0138 |
| P2.5 retina | GTCATAGCTG (2) TAAAGTTTTT (2)
| 3.6 | 0.0036 |
| P4.5 retina | GTCATAGCTG (2) TAAGAATAAA (3)
| 6 | 0.006 |
| P6.5 retina | GTCATAGCTG (2) TAAGAATAAA (3) TTATTTATTA (4)
| 8.3 | 0.0083 |
| P10.5 crx- retina | TAAAGTTTTT (2) TAAGAATAAA (3) TACACATACA
| 7.5 | 0.0075 |
| P10.5 crx+ retina | TAAGAATAAA (3) TACACATACA
| 3.8 | 0.0038 |
| Adult retinal | ATTACGCCAA GTCATAGCTG (2) TAAAGTTTTT (2)
| 7.5 | 0.0075 |
| ONL | GTCATAGCTG (2) TAAGAATAAA (3) TACACATACA
| 11.4 | 0.0114 |