| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GATTCCGTGA TCTGAATCTG
| 143.5 | 0.1435 |
| Cb medulloblastoma | GATTCCGTGA TCTGAATCTG
| 53.2 | 0.0532 |
| P8 GC+1d culture | GATTCCGTGA
| 124.4 | 0.1244 |
| P8 GC+SHH+1d culture | GATTCCGTGA GTGGACCGGC (3) TCTGAATCTG
| 167.5 | 0.1675 |
| 3T3 fibroblasts | GATTCCGTGA GTCATAGCTG (2) GTGGACCGGC (3)
| 227.8 | 0.2278 |
| E15 cortex | GATTCCGTGA GTCATAGCTG (2)
| 74.2 | 0.0742 |
| P1 cortex | GATTCCGTGA TCTGAATCTG
| 36.3 | 0.0363 |
| Hypothalamus | GATTCCGTGA TCTGAATCTG
| 105 | 0.105 |
| E12.5 retina | GATTCCGTGA TCTGAATCTG
| 368 | 0.368 |
| E14.5 retina | GATTCCGTGA GTGGACCGGC (3) TCTGAATCTG
| 202.2 | 0.2022 |
| E16.5 retina | GATTCCGTGA GTGGACCGGC (3) TCTGAATCTG
| 226.4 | 0.2264 |
| E18.5 retina | GATTCCGTGA GTGGACCGGC (3) TCTGAATCTG
| 132.8 | 0.1328 |
| P0.5 retina | GATTCCGTGA GTCATAGCTG (2) TCTGAATCTG
| 147.1 | 0.1471 |
| P2.5 retina | CTAAGAAAAT (2) GATTCCGTGA GTCATAGCTG (2) TCTGAATCTG
| 156.7 | 0.1567 |
| P4.5 retina | GATTCCGTGA GTCATAGCTG (2) TCTGAATCTG
| 130.8 | 0.1308 |
| P6.5 retina | CTAAGAAAAT (2) GATTCCGTGA GTCATAGCTG (2) GTGGACCGGC (3) TCTGAATCTG
| 151.7 | 0.1517 |
| P10.5 crx- retina | CTAAGAAAAT (2) GATTCCGTGA GTGGACCGGC (3) TCTGAATCTG
| 211.8 | 0.2118 |
| P10.5 crx+ retina | GATTCCGTGA TCTGAATCTG
| 99.9 | 0.0999 |
| Adult retinal | GATTCCGTGA GTCATAGCTG (2)
| 77.8 | 0.0778 |
| ONL | GATTCCGTGA GTCATAGCTG (2) GTGGACCGGC (3)
| 45.9 | 0.0459 |