Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.116418	A730008L03Rik	RIKEN cDNA A730008L03 gene	2		58202
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	COBRA1[cofactor of BRCA1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAACTGAGA 1.6 0.0016 Cb medulloblastoma CTAACTGAGA GACTCAGCTC 6.9 0.0069 P8 GC+1d culture CTAACTGAGA GACTCACTCA (2) GGCTGGGGGA TCTTTGGCAG 11.3 0.0113 P8 GC+SHH+1d culture CTAACTGAGA GACTCAGCTC 5.9 0.0059 3T3 fibroblasts CTAACTGAGA 7 0.007 E15 cortex CTAACTGAGA GACTCAGCTC 9.8 0.0098 Hypothalamus GACTCAGTCA 1.8 0.0018 E12.5 retina CTAACTGAGA GACTCACTCA (2) 7.5 0.0075 E14.5 retina CTAACTGAGA GACTCAGTCA 9.1 0.0091 E16.5 retina CTAACTGAGA GACTCACTCA (2) GACTCAGCTC GACTCAGTCA 10.8 0.0108 P0.5 retina CTAACTGAGA GACTCACTCA (2) 5.9 0.0059 P2.5 retina GACTCACTCA (2) GACTCAGCTC GGCTGGGGGA TCTTTGGCAG 7.2 0.0072 P4.5 retina CTAACTGAGA 2 0.002 P6.5 retina CTAACTGAGA GACTCACTCA (2) TCTTTGGCAG 13.3 0.0133 P10.5 crx- retina CTAACTGAGA GACTCAGCTC TCTTTGGCAG 18.6 0.0186 P10.5 crx+ retina CTAACTGAGA GACTCAGCTC GTGCTGGAGT 7.6 0.0076 Adult retinal CTAACTGAGA GACTCACTCA (2) GACTCAGCTC TCTTTGGCAG 11.2 0.0112 ONL CTAACTGAGA GACTCAGCTC GGCTGGGGGA GTGCTGGAGT TCTTTGGCAG 9.5 0.0095