| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGAGTCACTG CCTTGTCCTG TTTTTATTTT (4)
| 19.6 | 0.0196 |
| Cb medulloblastoma | CCTTGTCCTG TTTTTATTTT (4)
| 6.9 | 0.0069 |
| P8 GC+1d culture | CCTTGTCCTG GGACCTGGCC TGGCTCTTTC (3) TTTTTATTTT (4)
| 18.2 | 0.0182 |
| P8 GC+SHH+1d culture | CCTTGTCCTG TGATGGACTG (3) TTTTTATTTT (4)
| 14 | 0.014 |
| 3T3 fibroblasts | CCTTGTCCTG
| 3.5 | 0.0035 |
| E15 cortex | CCTTGTCCTG
| 9.9 | 0.0099 |
| P1 cortex | CCTTGTCCTG GGACCTGGCC
| 9 | 0.009 |
| Hypothalamus | AGAGTCACTG GGACCTGGCC TTTTTATTTT (4)
| 9 | 0.009 |
| E12.5 retina | CCTTGTCCTG TTTTTATTTT (4)
| 9.4 | 0.0094 |
| E14.5 retina | AGAGTCACTG TTTTTATTTT (4)
| 5.4 | 0.0054 |
| E16.5 retina | CCTTGTCCTG TTTTTATTTT (4)
| 5.4 | 0.0054 |
| E18.5 retina | CCTTGTCCTG TTTTTATTTT (4)
| 7.2 | 0.0072 |
| P0.5 retina | CCTTGTCCTG TTTTTATTTT (4)
| 4 | 0.004 |
| P2.5 retina | CCTTGTCCTG TTTTTATTTT (4)
| 7.1 | 0.0071 |
| P4.5 retina | CCTTGTCCTG TTTTTATTTT (4)
| 8 | 0.008 |
| P6.5 retina | CCTTGTCCTG GGACCTGGCC TTTTTATTTT (4)
| 10 | 0.01 |
| P10.5 crx- retina | AGAGTCACTG CCTTGTCCTG GGACCTGGCC TGGCTCTTTC (3) TTTTTATTTT (4)
| 11.3 | 0.0113 |
| P10.5 crx+ retina | CCTTGTCCTG GGACCTGGCC TTTTTATTTT (4)
| 13.5 | 0.0135 |
| Adult retinal | AATCTGAGAC (3) CCTTGTCCTG TTTTTATTTT (4)
| 11.2 | 0.0112 |
| ONL | AATCTGAGAC (3) CCTTGTCCTG TGGCTCTTTC (3) TTTTTATTTT (4)
| 11.4 | 0.0114 |