Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.121265	Psma1	proteasome (prosome, macropain) subunit, alpha type 1	7	7 53.0 cM	26440
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | membrane | peptidase activity | proteasome core complex (sensu Eukarya) | transport | transporter activity | ubiquitin-dependent protein catabolism
Human Homolog	PSMA1[proteasome (prosome, macropain) subunit, alpha type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACAAAAAAA (2) ATGATGATGA (2) GAAACATTCT GGCCTTCCAA GTCTGCGTGC TTCTGTTTTT (2) TTGACAACCA TTTATTAAAA (2) 26 0.026 Cb medulloblastoma AACAAAAAAA (2) ATGATGATGA (2) GAAACATTCT GGCCTTCCAA GTCTGCGTGC TTCTGTTTTT (2) TTGAAAACCA 23 0.023 P8 GC+1d culture AACAAAAAAA (2) ATGATGATGA (2) CAGAGCAGAC GCCCCTAAAA (4) GTCTGCGTGC TGTGTGGTTG TTTATTAAAA (2) 25.1 0.0251 P8 GC+SHH+1d culture AACAAAAAAA (2) ATGATGATGA (2) GAAACATTCT GCCCCTAAAA (4) GTCTGCGTGC TTTATTAAAA (2) 21.1 0.0211 3T3 fibroblasts GTCTGCGTGC 24.5 0.0245 E15 cortex AACAAAAAAA (2) GTCTGCGTGC 24.7 0.0247 P1 cortex GAAACATTCT GTCTGCGTGC GTGGGCGGTG 22.7 0.0227 Hypothalamus AACAAAAAAA (2) GTCTGCGTGC TTTATTAAAA (2) 7.2 0.0072 E12.5 retina AACAAAAAAA (2) ATGATGATGA (2) CAGAGCAGAC GTCTGCGTGC TTGAAAACCA 20.8 0.0208 E14.5 retina AACAAAAAAA (2) ATGATGATGA (2) GAAACATTCT TTTATTAAAA (2) 14.5 0.0145 E16.5 retina ATGATGATGA (2) GAAACATTCT GGCCTTCCAA GTCTGCGTGC GTGGGCGGTG TTTATTAAAA (2) 14.4 0.0144 E18.5 retina AACAAAAAAA (2) ATGATGATGA (2) GTCTGCGTGC TTGAAAACCA TTGACAACCA 20 0.02 P0.5 retina AACAAAAAAA (2) ATGATGATGA (2) GTCTGCGTGC TTTATTAAAA (2) 23.6 0.0236 P2.5 retina AACAAAAAAA (2) ATGATGATGA (2) GGCCTTCCAA GTCTGCGTGC 24.7 0.0247 P4.5 retina AACAAAAAAA (2) CAGAGCAGAC GAAACATTCT GTCTGCGTGC TTTATTAAAA (2) 12 0.012 P6.5 retina ATGATGATGA (2) CAGAGCAGAC GTCTGCGTGC TTGACAACCA TTTATTAAAA (2) 18.4 0.0184 P10.5 crx- retina AACAAAAAAA (2) GAAACATTCT GTCTGCGTGC GTGGGCGGTG TTCTGTTTTT (2) TTTATTAAAA (2) 15 0.015 P10.5 crx+ retina AACAAAAAAA (2) GAAACATTCT GTCTGCGTGC GTGGGCGGTG TTTATTAAAA (2) 21.1 0.0211 Adult retinal GGCCTTCCAA GTCTGCGTGC 9.3 0.0093 ONL ATGATGATGA (2) GTCTGCGTGC TTTATTAAAA (2) 7.6 0.0076