Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1222	Gap43	growth associated protein 43	16	16 29.5 cM	14432
Gene Ontology	axon | calmodulin binding | membrane | neurogenesis | regulation of cell growth | regulation of growth
Human Homolog	GAP43[growth associated protein 43]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGTAATCA ATTTATTACT CCTGAACTTT (3) 26 0.026 Cb medulloblastoma AGAGTAATCA ATTTATTACT 27.7 0.0277 P8 GC+1d culture AGAGTAATCA ATTTATTAAT CCTGAACTTT (3) CTGTGCTGTA 115.3 0.1153 P8 GC+SHH+1d culture AGAGTAATCA ATTTATTACT CCTGAACTTT (3) 121.8 0.1218 3T3 fibroblasts CCTGGACTTT 3.5 0.0035 E15 cortex AGAGTAATCA CCTGAACTTT (3) 19.7 0.0197 P1 cortex AGAGTAATCA ATTTATTACT CCTGAACTTT (3) 118.2 0.1182 Hypothalamus AGAGTAATCA ATTTATTACT CCTGAACTTT (3) CTGTGCTGTA 104.9 0.1049 E12.5 retina AGAGTAATCA CCTGAACTTT (3) 30.1 0.0301 E14.5 retina AGAGTAATCA ATTTATTAAT ATTTATTACT 80.1 0.0801 E16.5 retina AGAGTAATCA ATTTATTAAT ATTTATTACT CCTGAACTTT (3) CTGTGCTGTA 68.7 0.0687 E18.5 retina AGAGTAATCA CCTGAACTTT (3) 105.5 0.1055 P0.5 retina AGAGTAATCA ATTTATTAAT ATTTATTACT CCTGAACTTT (3) CCTGGACTTT 45.2 0.0452 P2.5 retina AGAGTAATCA ATTTATTACT CCTGAACTTT (3) 24.7 0.0247 P4.5 retina AGAGTAATCA ATTTATTACT CCTGAACTTT (3) 31.7 0.0317 P6.5 retina AGAGTAATCA ATTTATTACT 36.7 0.0367 P10.5 crx- retina ATTTATTACT CCTGAACTTT (3) CCTGGACTTT 7.5 0.0075 P10.5 crx+ retina AGAGTAATCA ATTTATTACT CTGTGCTGTA 17.3 0.0173 Adult retinal ATTTATTACT 1.9 0.0019 ONL ATTTATTACT 1.9 0.0019