| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGCAGACTA (3) ATGATAATAA (4) CCATTTTTAT GAATAAATAA (3) TGGTTGCTGG
| 83.1 | 0.0831 |
| Cb medulloblastoma | GTGGCTGGGG TGATGGGTTG (3) TGGTTGCTGG
| 120.2 | 0.1202 |
| P8 GC+1d culture | AAGCAGACTA (3) ATGATAATAA (4) CCATTTTTAT GCGGCGCTGG (4) GGGACCCCTG (4) TGATGGGTTG (3) TGGTTGCTGG
| 68.4 | 0.0684 |
| P8 GC+SHH+1d culture | GAATAAATAA (3) GAGTATGGCC (3) TGGGTACTGG TGGTTGCTGG
| 92.6 | 0.0926 |
| 3T3 fibroblasts | TGGTTGCTGG
| 220.8 | 0.2208 |
| E15 cortex | TGATGGGTTG (3) TGGTTGCTGG
| 282 | 0.282 |
| P1 cortex | AAGCAGACTA (3) TGGTTGCTGG
| 90.9 | 0.0909 |
| Hypothalamus | AAGCAGACTA (3) ATGATAATAA (4) GGGACCCCTG (4) TAACCCAGGC TGATGGGTTG (3) TGGGTACTGG TGGTTGCTGG
| 367.6 | 0.3676 |
| E12.5 retina | AAGCAGACTA (3) GAATAAATAA (3) GAGTATGGCC (3) GGGAAGGGGA TGGTTGCTGG
| 167.2 | 0.1672 |
| E14.5 retina | AAGCAGACTA (3) ATGATAATAA (4) GAATAAATAA (3) GCGGCGCTGG (4) TGGGTACTGG TGGTTGCTGG
| 949.2 | 0.9492 |
| E16.5 retina | CCATTTTTAT TGATGGGTTG (3) TGGGTACTGG TGGTTGCTGG
| 775.1 | 0.7751 |
| E18.5 retina | AAGCAGACTA (3) ATGATAATAA (4) CCATTTTTAT GAATAAATAA (3) GAGTATGGCC (3) TGATGGGTTG (3) TGGTTGCTGG
| 274.5 | 0.2745 |
| P0.5 retina | AAGCAGACTA (3) GCTCCTGCTT (3) TGATGGGTTG (3) TGGGTACTGG TGGTTGCTGG
| 198.4 | 0.1984 |
| P2.5 retina | AAGCAGACTA (3) GAATAAATAA (3) GGGAAGGGGA TGATGGGTTG (3) TGGTTGCTGG
| 174.3 | 0.1743 |
| P4.5 retina | AAGCAGACTA (3) GCTCCTGCTT (3) GGGAAGGGGA GGGACCCCTG (4) TGGGTACTGG TGGTTGCTGG
| 170.5 | 0.1705 |
| P6.5 retina | AAGCAGACTA (3) ATGATAATAA (4) CCATTTTTAT GCGGCGCTGG (4) TGATGGGTTG (3) TGGGTACTGG TGGTTGCTGG
| 178.5 | 0.1785 |
| P10.5 crx- retina | AAGCAGACTA (3) ATGATAATAA (4) GGGACCCCTG (4) GTGGCTGGGG TAACCCAGGC TGATGGGTTG (3) TGGGTACTGG TGGTTGCTGG
| 302.9 | 0.3029 |
| P10.5 crx+ retina | AAGCAGACTA (3) ATGATAATAA (4) GTGGCTGGGG TGGTTGCTGG
| 107.6 | 0.1076 |
| Adult retinal | AAGCAGACTA (3) CCATTTTTAT GAGTATGGCC (3) TGATGGGTTG (3) TGGTTGCTGG
| 227.9 | 0.2279 |
| ONL | AAGCAGACTA (3) ATGATAATAA (4) GAATAAATAA (3) TGATGGGTTG (3) TGGTTGCTGG
| 409.8 | 0.4098 |