Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.127405	1700129L13Rik	RIKEN cDNA 1700129L13 gene	10		67933
Human Homolog	HCFC2[host cell factor C2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (2) TACAGTGACT (2) TTAAGTCACC (2) 16.3 0.0163 Cb medulloblastoma CACACACACA (2) GGCCCACATC (4) GTTCTAATAC TACAGTGACT (2) TTAAGTCACC (2) 41.6 0.0416 P8 GC+1d culture CACACACACA (2) GATTTGTCTG (2) GGCCCACATC (4) GTTCTAATAC 11.3 0.0113 P8 GC+SHH+1d culture CACACACACA (2) GGCCCACATC (4) TACAGTGACT (2) TTAAGTCACC (2) 14.1 0.0141 3T3 fibroblasts CACACACACA (2) TACAGTGACT (2) TTAAGTCACC (2) 31.5 0.0315 E15 cortex CACACACACA (2) GGCCCACATC (4) 9.8 0.0098 P1 cortex CACACACACA (2) GGCCCACATC (4) TACAGTGACT (2) TTAAGTCACC (2) 40.8 0.0408 Hypothalamus CACACACACA (2) GGCCCACATC (4) TACAGTGACT (2) TTAAGTCACC (2) 115.9 0.1159 E12.5 retina CACACACACA (2) GGCCCACATC (4) 5.7 0.0057 E14.5 retina CACACACACA (2) TTAAGTCACC (2) 20 0.02 E16.5 retina CACACACACA (2) GGCCCACATC (4) 16.3 0.0163 E18.5 retina CACACACACA (2) GGCCCACATC (4) GTTCTAATAC TTAAGTCACC (2) 10.9 0.0109 P0.5 retina CACACACACA (2) GATTTGTCTG (2) 9.9 0.0099 P2.5 retina CACACACACA (2) TTAAGTCACC (2) 22.9 0.0229 P4.5 retina CACACACACA (2) GATTTGTCTG (2) GTTCTAATAC TTAAGTCACC (2) 13.9 0.0139 P6.5 retina CACACACACA (2) GGCCCACATC (4) TACAGTGACT (2) 13.3 0.0133 P10.5 crx- retina CACACACACA (2) GATTTGTCTG (2) GGCCCACATC (4) 14.9 0.0149 P10.5 crx+ retina CACACACACA (2) GTTCTAATAC 11.5 0.0115 Adult retinal CACACACACA (2) GATTTGTCTG (2) GGCCCACATC (4) TACAGTGACT (2) 27.9 0.0279 ONL CACACACACA (2) GATTTGTCTG (2) 26.8 0.0268