Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1287	Mapt	microtubule-associated protein tau	11	11 64.0 cM	17762
Gene Ontology	cytoskeletal regulatory protein binding | cytoskeleton | microtubule associated complex | microtubule stabilization | microtubule-based process | protein binding
Human Homolog	MAPT[microtubule-associated protein tau]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 163 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAGGGTT ATGGACTTTA ATTTCCTTTG ATTTCTTTGG CTGCCTGCCC (2) GAGAGAAGAG GAGCAGAAAT TGACTCAAGC TTTTTTTTTC (3) 30.9 0.0309 Cb medulloblastoma ATTTCCTTTG CTGCCTGCCC (2) GAGAGAAGAG GTGGACTCAC (2) TGACTCAAGC TTTTTTTTTC (3) 32.3 0.0323 P8 GC+1d culture AAAAAGGGTT ATGGACTTTA ATTTCTTTGG CACGTAATCA CCTCTCCCAG CTGCCTGCCC (2) GAGAGAAGAG GAGCAGAAAT GCCAAAATTT GCTTAAAAGA (2) TGACTCAAGC TGTTGGAGGG (2) TTTTGAAGGG 48.9 0.0489 P8 GC+SHH+1d culture AAAAAGGGTT ATGGACTTTA ATTCGAGGGA ATTTCCTTTG ATTTCTTTGG ATTTGGAGTG CTGCCTGCCC (2) GAGAGAAGAG GAGCAGAAAT GCCAAAATTT TGACTCAAGC TGTTGGAGGG (2) TTTTTTTTTC (3) 45.6 0.0456 3T3 fibroblasts ATCTCCAGTG CTGCCTGCCC (2) 10.5 0.0105 E15 cortex ATTTCCTTTG ATTTCTTTGG CTGCCTGCCC (2) GAGAGAAGAG GCCAAAAAAT (3) TTTTGAAGGG 103.7 0.1037 P1 cortex AAAAAGGGTT ATTTCCTTTG ATTTCTTTGG CTGCCTGCCC (2) GAGAGAAGAG GTGGACTCAC (2) TGACTCAAGC TTTTTTTTTC (3) 254.4 0.2544 Hypothalamus AAAAAGGGTT ACGACCCAGT ATTTCCTTTG ATTTCTTTGG ATTTGGAGTG CACGTAATCA CTGCCTGCCC (2) GAGAGAAGAG GCCAAAAAAT (3) GGGACTTAAT TGTTGGAGGG (2) TTTTGAAGGG TTTTTTTTTC (3) 61.5 0.0615 E12.5 retina AAAAAGGGTT ATTTCCTTTG CCCAGTACAG GAGAGAAGAG TTTTTTTTTC (3) 26.3 0.0263 E14.5 retina AAAAAGGGTT ACGACCCAGT ATTTCCTTTG CACGTAATCA CCTCTCCCAG CTGCCTGCCC (2) GAAACCAGGC (2) GAGAGAAGAG GAGCAGAAAT GGGACTTAAT TGTTGGAGGG (2) TTTTTTTTTC (3) 63.6 0.0636 E16.5 retina ATTTCCTTTG ATTTCTTTGG ATTTGGAGTG CACGTAATCA CTGCCTGCCC (2) GAAACCAGGC (2) GAGAGAAGAG 57.9 0.0579 E18.5 retina ATTTCCTTTG ATTTCTTTGG CTGCCTGCCC (2) GAGAGAAGAG GGGACTTAAT GTGGACTCAC (2) TTTTTTTTTC (3) 41.8 0.0418 P0.5 retina AAAAAGGGTT ATTTCCTTTG ATTTCTTTGG CTGCCTGCCC (2) GAGAGAAGAG GAGCAGAAAT GCCAAAAAAT (3) GCCAAAATTT 45.2 0.0452 P2.5 retina AAAAAGGGTT ATGGACTTTA ATTTCTTTGG CTGCCTGCCC (2) GAGAGAAGAG GCTTAAAAGA (2) GTGGACTCAC (2) TGTTGGAGGG (2) TTTTTTTTTC (3) 63.4 0.0634 P4.5 retina AAAAAGGGTT ATTTCCTTTG CTGCCTGCCC (2) GAAACCAGGC (2) GAGAGAAGAG GCCAAAATTT GCTTAAAAGA (2) GTGGACTCAC (2) TTTTTTTTTC (3) 41.8 0.0418 P6.5 retina ATGGACTTTA ATTTCTTTGG CACGTAATCA CCCAGTACAG CTGCCTGCCC (2) GAGAGAAGAG GCCAAAATTT GCTTAAAAGA (2) TGTTGGAGGG (2) 40.1 0.0401 P10.5 crx- retina AAAAAGGGTT ATTTCCTTTG ATTTCTTTGG CCTCTCCCAG CTGCCTGCCC (2) GAGAGAAGAG GCTTAAAAGA (2) TGTTGGAGGG (2) 65.1 0.0651 P10.5 crx+ retina AAAAAGGGTT ATCTCCAGTG CTGCCTGCCC (2) GAAACCAGGC (2) GAGAGAAGAG GTGGACTCAC (2) TGTTGGAGGG (2) 30.6 0.0306 Adult retinal ATTCGAGGGA ATTTCCTTTG CCCAGTACAG CTGCCTGCCC (2) GAGAGAAGAG GCTTAAAAGA (2) GTGGACTCAC (2) TGTTGGAGGG (2) 28.1 0.0281 ONL ATTCGAGGGA ATTTCTTTGG GCTTAAAAGA (2) GTGGACTCAC (2) 9.5 0.0095