Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.128733	D0H4S114	DNA segment, human D4S114	18	18 B1	27528
Human Homolog	C5orf13[chromosome 5 open reading frame 13]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 153 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TAAAAATTAA (2) TACTCTTTTG TGGGAAAAAA TTCCTGTGTC (2) 96.3 0.0963 Cb medulloblastoma CACTGTCCCT (2) GAAAAAAAAA (2) GGGGAAAAAA (4) GGTAAAATAT TAAAAATTAA (2) TACTCTTTTG TCCTGGGATG TGGGAAAAAA TTCCTGTGTC (2) 235.7 0.2357 P8 GC+1d culture ATGCCCTTTT (2) CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGGGAAAAAA (4) GGTAAAATAT TAAAAATTAA (2) TCCTGGGATG TGGGAAAAAA TTCCTGTGTC (2) TTCTAAGAAG 178 0.178 P8 GC+SHH+1d culture ATGCCCTTTT (2) CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGAGTTTAAC GGTAAAATAT TAAAAATTAA (2) TCCTGGGATG TGGGAAAAAA TTCCTGTGTC (2) TTCTAAGAAG TTTCTTGTGG 174.5 0.1745 3T3 fibroblasts TTCCTGTGTC (2) 3.5 0.0035 E15 cortex CACTGTCCCT (2) GAAAAAAAAA (2) GGGGAAAAAA (4) TAAAAATTAA (2) TGGGAAAAAA TTCCTGTGTC (2) TTTCTTGTGG 108.6 0.1086 P1 cortex CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TGGGAAAAAA TTCCTGTGTC (2) TTCTAAGAAG 122.6 0.1226 Hypothalamus CACTGTCCCT (2) GAAAAAAAAA (2) GGAGTTTAAC TAAAAATTAA (2) TACTCTTTTG TCCTGGGATG TGGGAAAAAA TTCTAAGAAG 90.4 0.0904 E12.5 retina CACTGTCCCT (2) GAAAAAAAAA (2) GGGGAAAAAA (4) GGTAAAATAT TTCCTGTGTC (2) 71.3 0.0713 E14.5 retina CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TAAAAATTAA (2) TGGGAAAAAA TTCCTGTGTC (2) 63.6 0.0636 E16.5 retina CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGGGAAAAAA (4) GGTAAAATAT TAAAAATTAA (2) TCCTGGGATG TGGGAAAAAA TTCTAAGAAG TTTTTATTAA (2) 59.6 0.0596 E18.5 retina CACTGTCCCT (2) GAAAAAAAAA (2) GGGGAAAAAA (4) GGTAAAATAT TAAAAATTAA (2) TGGGAAAAAA 98.2 0.0982 P0.5 retina CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TGGGAAAAAA TTTTTATTAA (2) 76.5 0.0765 P2.5 retina ATGCCCTTTT (2) CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TAAAAATTAA (2) TACTCTTTTG TCCTGGGATG TGGGAAAAAA TTCCTGTGTC (2) TTCTAAGAAG 125.2 0.1252 P4.5 retina CACTGTCCCT (2) GAAAAAAAAA (2) GGTAAAATAT TAAAAATTAA (2) TCCTGGGATG TGGGAAAAAA 99.1 0.0991 P6.5 retina CACTGTCCCT (2) GAAAAAAAAA (2) GGAGTTTAAC GGGGAAAAAA (4) GGTAAAATAT TAAAAATTAA (2) TCCTGGGATG TCTCTTGGGG TGGGAAAAAA TTCCTGTGTC (2) TTTCTTGTGG 123.5 0.1235 P10.5 crx- retina CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) TAAAAATTAA (2) TCCTGGGATG TGGGAAAAAA TTCTAAGAAG 68.8 0.0688 P10.5 crx+ retina CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TCCTGGGATG TTCCTGTGTC (2) 88.3 0.0883 Adult retinal CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) TCCTGGGATG TGGGAAAAAA TTCCTGTGTC (2) TTTTTATTAA (2) 35.4 0.0354 ONL CACTGTCCCT (2) CATCATTGGT GAAAAAAAAA (2) GGTAAAATAT TCTCTTGGGG TGGGAAAAAA TTCCTGTGTC (2) TTTCTTGTGG 38.2 0.0382