Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12964	Nsd1	nuclear receptor-binding SET-domain protein 1	13	13 B1	18193
Gene Ontology	gastrulation (sensu Mammalia) | histone methyltransferase activity | negative regulation of transcription from Pol II promoter | nucleus | protein binding | receptor activity | regulation of transcription, DNA-dependent | transcription cofactor activity
Human Homolog	NSD1[nuclear receptor binding SET domain protein 1] | NSD1[nuclear receptor binding SET domain protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGAAAAAAA (2) CGGCAAAAAA (2) 6.5 0.0065 Cb medulloblastoma CGGAAAAAAA (2) CGGCAAAAAA (2) GGCTGACGGA 13.8 0.0138 P8 GC+1d culture CGGAAAAAAA (2) CGGCAAAAAA (2) GGCTGACGGA 14.8 0.0148 P8 GC+SHH+1d culture CGGAAAAAAA (2) CGGCAAAAAA (2) GGCTGACGGA 9.4 0.0094 3T3 fibroblasts GTCATAGCTG (2) 10.5 0.0105 E15 cortex CGGCAAAAAA (2) GTCATAGCTG (2) GTGTTACTTG (2) 14.7 0.0147 Hypothalamus CGGCAAAAAA (2) GGCTGACGGA 5.4 0.0054 E12.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) GTGTTACTTG (2) 5.7 0.0057 E14.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) 9.1 0.0091 E16.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) GTGTTACTTG (2) 7.2 0.0072 E18.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) 9.1 0.0091 P0.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) GTCATAGCTG (2) 9.8 0.0098 P2.5 retina CGGCAAAAAA (2) GGCTGACGGA GTCATAGCTG (2) GTGTTACTTG (2) 7.2 0.0072 P4.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) GGCTGACGGA GTCATAGCTG (2) GTGTTACTTG (2) 19.8 0.0198 P6.5 retina CGGAAAAAAA (2) CGGCAAAAAA (2) GTCATAGCTG (2) 16.6 0.0166 P10.5 crx- retina CGGAAAAAAA (2) CGGCAAAAAA (2) GTGTTACTTG (2) 5.7 0.0057 P10.5 crx+ retina CGGAAAAAAA (2) CGGCAAAAAA (2) GGCTGACGGA GTGTTACTTG (2) 11.5 0.0115 Adult retinal CGGAAAAAAA (2) CGGCAAAAAA (2) GTCATAGCTG (2) GTGTTACTTG (2) 7.6 0.0076 ONL GTCATAGCTG (2) GTGTTACTTG (2) 7.6 0.0076