Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.130054	C630044B11Rik	RIKEN cDNA C630044B11 gene	13		78712
Mm.130054	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	13	13 36.0 cM	18212
Gene Ontology	ATP binding | cytosol | feeding behavior | integral to membrane | kinase activity | membrane | neurogenesis | plasma membrane | protein amino acid phosphorylation | protein binding | protein kinase activity | protein-tyrosine kinase activity | receptor activity | regulation of metabolism | retinal rod cell development | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	NTRK2[neurotrophic tyrosine kinase, receptor, type 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCCGAATT (2) CCAAACTTGG (2) 3.2 0.0032 Cb medulloblastoma CTGTCTAGAG (4) TCCACCAGAT (2) 4.6 0.0046 P8 GC+1d culture AAAGGTTTTG (2) CTGTCTAGAG (4) TCTGTCTGTC (3) TCTGTTTGTC 9 0.009 P8 GC+SHH+1d culture AAAGGTTTTG (2) CCAAACTTGG (2) CTGTCTAGAG (4) TCTGTTTGTC 4.8 0.0048 E15 cortex CCAAACTTGG (2) CTGTCTAGAG (4) GACCTCAGCA (2) TCCACCAGAT (2) 24.6 0.0246 P1 cortex AAAGGTTTTG (2) TCTGTTTGTC 18.1 0.0181 Hypothalamus GACCTCAGCA (2) 1.8 0.0018 E14.5 retina CTGTCTAGAG (4) 1.8 0.0018 E16.5 retina TCTGTTTGTC 1.8 0.0018 P0.5 retina CTGTCTAGAG (4) TCCACCAGAT (2) TCTGTCTGTC (3) TCTGTTTGTC 9.9 0.0099 P2.5 retina TCCACCAGAT (2) TCTGTCTGTC (3) 3.6 0.0036 P4.5 retina ATTCCGAATT (2) 2 0.002 P6.5 retina ATTCCGAATT (2) CTGTCTAGAG (4) TCTGTCTGTC (3) TCTGTTTGTC 10 0.01 P10.5 crx- retina CTGTCTAGAG (4) TCTGTTTGTC 13 0.013 P10.5 crx+ retina TCTGTCTGTC (3) TCTGTTTGTC 3.8 0.0038 Adult retinal AAAGGTTTTG (2) TCCACCAGAT (2) TCTGTCTGTC (3) TCTGTTTGTC 13.1 0.0131 ONL ATTCCGAATT (2) 3.8 0.0038