Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.131150	Dek	DEK oncogene (DNA binding)	13	13 28.0 cM	110052
Gene Ontology	cell growth and/or maintenance | DNA binding | nucleus | pathogenesis | regulation of transcription from Pol II promoter | signal transduction | specific RNA polymerase II transcription factor activity | viral life cycle
Human Homolog	DEK[DEK oncogene (DNA binding)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGCCCCT (2) GCAGAAGTGA TAACATCACT TACGTGTTGG TGTGCTCACG TTAATCTTGC 32.6 0.0326 Cb medulloblastoma ACAGAAGTGA (2) GCAGAAGTGA GCAGTAATCG TTAATCTTGC 23 0.023 P8 GC+1d culture ATTGTAAAAA (2) GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA TGTGCTCACG TTAATCTTGC 33 0.033 P8 GC+SHH+1d culture ACAGAAGTGA (2) ATTGTAAAAA (2) GACTGCCCCT (2) GCAGAAGTGA TGTGCTCACG TTAATCTTGC TTTCATCACT (2) 24.7 0.0247 3T3 fibroblasts GACTGCCCCT (2) GCAGAAGTGA TCGGCGGCGG TGTGCTCACG 101.5 0.1015 E15 cortex GACTGCCCCT (2) GCAGAAGTGA TCGGCGGCGG 19.7 0.0197 P1 cortex GACTGCCCCT (2) TGTCATCACT (2) TGTGCTCACG TTAATCTTGC 22.6 0.0226 Hypothalamus GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA TTAATCTTGC 14.4 0.0144 E12.5 retina ACAGAAGTGA (2) GACTGCCCCT (2) GCAGAAGTGA GCAGTAATCG TACGTGTTGG TTAATCTTGC 28.2 0.0282 E14.5 retina GACTGCCCCT (2) GCAGAAGTGA TTAATCTTGC 12.7 0.0127 E16.5 retina ACAGAAGTGA (2) GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA TTAAAGAGCA (2) TTAATCTTGC TTTCATCACT (2) 47 0.047 E18.5 retina ACAGAAGTGA (2) GACTGCCCCT (2) GCAGAAGTGA TGTGCTCACG TTTCATCACT (2) 20 0.02 P0.5 retina GACTGCCCCT (2) GCAGAAGTGA TACGTGTTGG TCGGCGGCGG TGTCATCACT (2) TGTGCTCACG TTAAAGAGCA (2) TTTCATCACT (2) 63 0.063 P2.5 retina ACAGAAGTGA (2) GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA TGTGCTCACG TTAAAGAGCA (2) 22.9 0.0229 P4.5 retina ACAGAAGTGA (2) GACTGCCCCT (2) GATTTATATA (3) TTAATCTTGC 10 0.01 P6.5 retina ATTGTAAAAA (2) GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA GCAGTAATCG TGTCATCACT (2) 23.3 0.0233 P10.5 crx- retina GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA GCAGTAATCG TTAATCTTGC 33.6 0.0336 P10.5 crx+ retina ATTGTAAAAA (2) GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA TAACATCACT TGTGCTCACG TTAATCTTGC 28.7 0.0287 Adult retinal ACAGAAGTGA (2) GACTGCCCCT (2) GCAGAAGTGA TGTCATCACT (2) TGTGCTCACG TTAAAGAGCA (2) 24.3 0.0243 ONL ACAGAAGTGA (2) GACTGCCCCT (2) GATTTATATA (3) GCAGAAGTGA GCAGTAATCG TTTCATCACT (2) 22.9 0.0229