Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13694	8030488J09Rik	RIKEN cDNA 8030488J09 gene	7		77504
Mm.13694	Oat	ornithine aminotransferase	7	7 63.0 cM	18242
Gene Ontology	mitochondrion | ornithine-oxo-acid transaminase activity | pyridoxal phosphate binding | transaminase activity | transferase activity
Human Homolog	OAT[ornithine aminotransferase (gyrate atrophy)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAATGTCAG (2) CCCGGCTTTT (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) TGGTTGCTGG 97.9 0.0979 Cb medulloblastoma AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) TGGTTGCTGG 150.2 0.1502 P8 GC+1d culture AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) GTGAGCCCAT (2) TGGTTGCTGG 68.4 0.0684 P8 GC+SHH+1d culture AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) TATTTTCAGT (2) TGGTTGCTGG 99.5 0.0995 3T3 fibroblasts AAGCTGCCCT (2) GGATCATTCT GTGAGCCCAT (2) TGGTTGCTGG 329.4 0.3294 E15 cortex AGAATGTCAG (2) GTGAGCCCAT (2) TGGTTGCTGG 405.7 0.4057 P1 cortex AAGCTGCCCT (2) GGATCATTCT GTGAGCCCAT (2) GTTGCTGTGA (2) TGGTTGCTGG 140.9 0.1409 Hypothalamus AAGCTGCCCT (2) AGAATGTCAG (2) CCCGGCTTTT (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) TATTTTCAGT (2) TGGTTGCTGG 380.3 0.3803 E12.5 retina GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) GTGGAAGCCC (2) TGGTTGCTGG 169.1 0.1691 E14.5 retina AGAATGTCAG (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) GTGGAAGCCC (2) TGGTTGCTGG 949.1 0.9491 E16.5 retina AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) GTGAGCCCAT (2) TGGTTGCTGG 784.1 0.7841 E18.5 retina AAGCTGCCCT (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) GTTGCTGTGA (2) TATTTTCAGT (2) TGGTTGCTGG 276.4 0.2764 P0.5 retina AGAATGTCAG (2) GAGAATGGCA (2) GCCAAGGGTT GTGAGCCCAT (2) GTGGAAGCCC (2) TATTTTCAGT (2) TGGTTGCTGG 214 0.214 P2.5 retina AGAATGTCAG (2) GAGAATGGCA (2) GTGAGCCCAT (2) TATTTTCAGT (2) TGGTTGCTGG 186.6 0.1866 P4.5 retina GAGAATGGCA (2) GTGAGCCCAT (2) TATTTTCAGT (2) TGGTTGCTGG 170.5 0.1705 P6.5 retina AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) GGATCATTCT GTGAGCCCAT (2) TGGTTGCTGG 176.7 0.1767 P10.5 crx- retina AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) TGGTTGCTGG 291.7 0.2917 P10.5 crx+ retina AAGCTGCCCT (2) AGAATGTCAG (2) CCCGGCTTTT (2) GAGAATGGCA (2) GTGAGCCCAT (2) TGGTTGCTGG 119.1 0.1191 Adult retinal AAGCTGCCCT (2) AGAATGTCAG (2) GAGAATGGCA (2) GTGAGCCCAT (2) TATTTTCAGT (2) TGGTTGCTGG 242.7 0.2427 ONL AAGCTGCCCT (2) GAGAATGGCA (2) GCCAAGGGTT TGGTTGCTGG 409.8 0.4098