Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.140761	Dnajc5	DnaJ (Hsp40) homolog, subfamily C, member 5	2	2 106.0 cM	13002
Gene Ontology	membrane | protein folding
Human Homolog	DNAJC5[DnaJ (Hsp40) homolog, subfamily C, member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 158 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATTAAAAA CAAGCTCATC CCACTGCTTA CCTCTGTTTG (2) GAAGTTTTGA GATTTGGTAG TGTCCCAGCA TTCTTGGACT TTCTTGTGAC TTTTTTTTTT (2) 45.7 0.0457 Cb medulloblastoma ACATTAAAAA CCACTGCTTA CCTCTGTTTG (2) GGTTCACAGC TTCTTGGACT TTTTTTTTTT (2) 41.6 0.0416 P8 GC+1d culture ACAGGCCTGC ACATTAAAAA CAAGCTCATC CCACTGCTTA CCTCTGTTTG (2) GATCAGCAGG (2) GATTTGGTAG GTGAGCTGTC GTGTCTGTTA TTCTTGTGAC TTTTTTTTTT (2) 53.6 0.0536 P8 GC+SHH+1d culture ACATTAAAAA CCACTGCTTA CCTCTGTTTG (2) GATCAGCAGG (2) GATTTGGTAG GGTTCACAGC GTGAGCTGTC GTGTCTGTTA TGTCCCAGCA TTCTTGTGAC TTTTTTTTTT (2) 45.8 0.0458 3T3 fibroblasts CAAGCTCATC CCTCTGTTTG (2) GTGCTGTCTG TTCTTGTGAC 17.5 0.0175 E15 cortex CAAGCTCATC CCTCTGTTTG (2) GATTTGGTAG GTGAGCTGTC TTTTTTTTTT (2) 49.3 0.0493 P1 cortex CAAGCTCATC CCTCTGTTTG (2) GATTTGGTAG TTTTTTTTTT (2) 40.8 0.0408 Hypothalamus ACATTAAAAA CAAGCTCATC CAGTATTTAA (2) CCTCTGTTTG (2) GATTTGGTAG GCGCCTGCCT GGTTCACAGC GTGTCTGTTA TTTTTTTTTT (2) 34.3 0.0343 E12.5 retina ACATTAAAAA CAAGCTCATC CCACTGCTTA CCTCTGTTTG (2) GATTTGGTAG GTGAGCTGTC TTCTTGGACT TTTTTTTTTT (2) 52.8 0.0528 E14.5 retina ACAGGCCTGC ACATTAAAAA CCTCTGTTTG (2) GAAGTTTTGA GATTTGGTAG GTGAGCTGTC TTCTTGTGAC TTTTTTTTTT (2) 60.1 0.0601 E16.5 retina ACATTAAAAA CCTCTGTTTG (2) GAAGTTTTGA GATCAGCAGG (2) GATTTGGTAG GCGCCTGCCT TTCTTGGACT TTCTTGTGAC TTTTTTTTTT (2) 39.8 0.0398 E18.5 retina ACATTAAAAA CAAGCTCATC CCACTGCTTA CCTCTGTTTG (2) GAAGTTTTGA GATCAGCAGG (2) GATTTGGTAG GCGCCTGCCT TTTTTTTTTT (2) 43.6 0.0436 P0.5 retina ACAGGCCTGC CCACTGCTTA CCTCTGTTTG (2) GATCAGCAGG (2) GATTTGGTAG GTGAGCTGTC TTCTTGTGAC TTTTTTTTTT (2) 49.2 0.0492 P2.5 retina ACATTAAAAA CCACTGCTTA CCTCTGTTTG (2) GATTTGGTAG GTGAGCTGTC TTTTTTTTTT (2) 30 0.03 P4.5 retina ACATTAAAAA CAAGCTCATC CAGTATTTAA (2) CCTCTGTTTG (2) GATTTGGTAG GGTTCACAGC TTCTTGTGAC TTTTTTTTTT (2) 63.5 0.0635 P6.5 retina ACATTAAAAA CAAGCTCATC CCTCTGTTTG (2) GATCAGCAGG (2) GGTTCACAGC GTGAGCTGTC GTGCTGTCTG TTTTTTTTTT (2) 58.4 0.0584 P10.5 crx- retina ACATTAAAAA CCACTGCTTA CCTCTGTTTG (2) GATTTGGTAG GTGAGCTGTC GTGTCTGTTA TTCTTGGACT 61.5 0.0615 P10.5 crx+ retina ACAGGCCTGC ACATTAAAAA CCTCTGTTTG (2) GATCAGCAGG (2) GATTTGGTAG GGTTCACAGC GTGAGCTGTC TTTTTTTTTT (2) 45.8 0.0458 Adult retinal CAAGCTCATC CCACTGCTTA CCTCTGTTTG (2) GATCAGCAGG (2) GATTTGGTAG GTGTCTGTTA TGTCCCAGCA TTCTTGGACT TTCTTGTGAC TTTTTTTTTT (2) 55.8 0.0558 ONL ACAGGCCTGC ACATTAAAAA CCACTGCTTA CCTCTGTTTG (2) GAAGTTTTGA GATCAGCAGG (2) GGTTCACAGC GTGAGCTGTC TTTTTTTTTT (2) 32.4 0.0324