| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TCTAAAAAAA (2) TGAAGATGAC (2) TGTTCACACT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | CTCGTGACAC (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 30.1 | 0.0301 |
| P8 GC+1d culture | GACAGGTGGT (3) TCTAAAAAAA (2) TGTTCACACT (2)
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | CTTTAACTAT (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | GACAGGTGGT (3) TGTTCACACT (2)
| 7 | 0.007 |
| P1 cortex | TCTAAAAAAA (2) TGAAGATGAC (2)
| 13.6 | 0.0136 |
| Hypothalamus | CTTTAACTAT (2) TCTAAAAAAA (2) TGAAGATGAC (2) TGTTCACACT (2)
| 23.6 | 0.0236 |
| E12.5 retina | TCTAAAAAAA (2) TGAAGATGAC (2) TGTTCACACT (2)
| 7.6 | 0.0076 |
| E14.5 retina | CTCGTGACAC (2) CTTTAACTAT (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 20 | 0.02 |
| E16.5 retina | CTTTAACTAT (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 7.2 | 0.0072 |
| E18.5 retina | CTTTAACTAT (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 20 | 0.02 |
| P0.5 retina | CTCGTGACAC (2) CTTTAACTAT (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 9.9 | 0.0099 |
| P2.5 retina | CTTTAACTAT (2) TCTAAAAAAA (2) TGAAGATGAC (2) TGTTCACACT (2)
| 19.5 | 0.0195 |
| P4.5 retina | GACAGGTGGT (3) TCTAAAAAAA (2) TGTTCACACT (2)
| 19.8 | 0.0198 |
| P6.5 retina | GACAGGTGGT (3) TCTAAAAAAA (2) TGAAGATGAC (2) TGTTCACACT (2)
| 23.4 | 0.0234 |
| P10.5 crx- retina | TCTAAAAAAA (2) TGTTCACACT (2)
| 9.3 | 0.0093 |
| P10.5 crx+ retina | TCTAAAAAAA (2) TGTTCACACT (2)
| 15.3 | 0.0153 |
| Adult retinal | CTTTAACTAT (2) GAGGAGTGAG (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 24.2 | 0.0242 |
| ONL | GAGGAGTGAG (2) TCTAAAAAAA (2) TGTTCACACT (2)
| 13.3 | 0.0133 |