Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.143689	Acsl4	acyl-CoA synthetase long-chain family member 4	X		50790
Gene Ontology	catalytic activity | fatty acid metabolism | integral to membrane | ligase activity | long-chain-fatty-acid-CoA ligase activity | magnesium ion binding | metabolism | regulation of fatty acid metabolism
Human Homolog	ACSL4[acyl-CoA synthetase long-chain family member 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATCCAAA GACAAAGGTG GATAGAATTT (3) GGTGGATTTA TGTATGTGTG (3) TTAACAAATC 14.7 0.0147 Cb medulloblastoma CACTCACATT GACAAAGGTG GATAGAATTT (3) TTATCAAAAA (2) 18.4 0.0184 P8 GC+1d culture CACTCACATT GACAAAGGTG TGTATGTGTG (3) TTAACAAATC TTATCAAAAA (2) 13.6 0.0136 P8 GC+SHH+1d culture AAAATCCAAA CACTCACATT GACAAAGGTG TCAGCCATCA TTAACAAATC TTATCAAAAA (2) 17.6 0.0176 3T3 fibroblasts GTGCTGTCTG 3.5 0.0035 P1 cortex AAATAAAAAC (3) TGTATGTGTG (3) 9 0.009 Hypothalamus AAAATCCAAA GACAAAGGTG GGTGGATTTA TCAGCCATCA TTATCAAAAA (2) 14.4 0.0144 E12.5 retina AAAATCCAAA AAATAAAAAC (3) CACTCACATT GACAAAGGTG TTATCAAAAA (2) 26.4 0.0264 E14.5 retina GACAAAGGTG TGTATGTGTG (3) TTATCAAAAA (2) 12.8 0.0128 E16.5 retina GACAAAGGTG TGTATGTGTG (3) 18.1 0.0181 E18.5 retina AAAATCCAAA CACTCACATT GACAAAGGTG TGTATGTGTG (3) TTAACAAATC 9 0.009 P0.5 retina GACAAAGGTG GATAGAATTT (3) 9.9 0.0099 P2.5 retina AAAATCCAAA AAATAAAAAC (3) GACAAAGGTG GATAGAATTT (3) TTAACAAATC TTATCAAAAA (2) 19.6 0.0196 P4.5 retina GGTGGATTTA TCAGCCATCA TTATCAAAAA (2) 6 0.006 P6.5 retina GACAAAGGTG GTGCTGTCTG TCAGCCATCA TTAACAAATC TTATCAAAAA (2) 13.4 0.0134 P10.5 crx- retina CACTCACATT GACAAAGGTG 3.8 0.0038 P10.5 crx+ retina AAATAAAAAC (3) GACAAAGGTG GATAGAATTT (3) GGTGGATTTA TTATCAAAAA (2) 17.2 0.0172 Adult retinal GACAAAGGTG GGTGGATTTA TGTATGTGTG (3) 9.4 0.0094 ONL AAAATCCAAA GAAGCTGAAA (2) GGTGGATTTA TCAGCCATCA TGTATGTGTG (3) TTAACAAATC TTATCAAAAA (2) 19 0.019