| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) CCCTGCTGCA (2)
| 208.8 | 0.2088 |
| Cb medulloblastoma | AAAAAAAAAA (2) GGGGGGGGGG
| 804.7 | 0.8047 |
| P8 GC+1d culture | AAAAAAAAAA (2) CCCTGCTGCA (2) CTGGTGGAAG (2) GGGGGGGGGG TCTGTCGGGG
| 212.3 | 0.2123 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) CCCTGCTGCA (2) CTGGTGGAAG (2) GGGGGGGGGG TCTGTCGGGG
| 291.6 | 0.2916 |
| 3T3 fibroblasts | AAAAAAAAAA (2) CCCTGCTGCA (2) CTGGTGGAAG (2) GGGGGGGGGG TCTGTCGGGG
| 49 | 0.049 |
| E15 cortex | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG TCTGTCGGGG
| 237.5 | 0.2375 |
| P1 cortex | AAAAAAAAAA (2) CTGGTGGAAG (2) TCTGTCGGGG
| 254.4 | 0.2544 |
| Hypothalamus | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG
| 128.6 | 0.1286 |
| E12.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2) CTGGTGGAAG (2)
| 148.3 | 0.1483 |
| E14.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2)
| 100.2 | 0.1002 |
| E16.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2)
| 48.9 | 0.0489 |
| E18.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2) CTGGTGGAAG (2)
| 382 | 0.382 |
| P0.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2) TCTGTCGGGG
| 121.8 | 0.1218 |
| P2.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG
| 337.9 | 0.3379 |
| P4.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG
| 295.2 | 0.2952 |
| P6.5 retina | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG
| 273.4 | 0.2734 |
| P10.5 crx- retina | AAAAAAAAAA (2) CCCTGCTGCA (2)
| 50.2 | 0.0502 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG
| 113.4 | 0.1134 |
| Adult retinal | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG TCTGTCGGGG
| 64.9 | 0.0649 |
| ONL | AAAAAAAAAA (2) CCCTGCTGCA (2) GGGGGGGGGG
| 107.2 | 0.1072 |