Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.14547	Cbx2	chromobox homolog 2 (Drosophila Pc class)	11	11 E2 (11 75.0 cM)	12416
Gene Ontology	chromatin | chromatin assembly/disassembly | chromatin binding | chromatin modification | DNA binding | nucleus | protein binding | regulation of transcription, DNA-dependent
Human Homolog	MGC10561[hypothetical protein MGC10561]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTGTTTG (2) AGAAGGAGGT GAGGAGCTGA (3) TGTGTAGTGC 21.1 0.0211 Cb medulloblastoma AAGCTGTTTG (2) 2.3 0.0023 P8 GC+1d culture AGAAGGAGGT GAGGAGCTGA (3) TGTGTAGTGC 85.6 0.0856 P8 GC+SHH+1d culture AAGCTGTTTG (2) AAGGGAAAAT AGAAGGAGGT GAGGAGCTGA (3) TGTGTAGTGC 59.7 0.0597 3T3 fibroblasts AGAAGGAGGT GTCATAGCTG (2) 24.5 0.0245 E15 cortex AAGCTGTTTG (2) AGAAGGAGGT GAGGAGCTGA (3) GTCATAGCTG (2) 163.2 0.1632 P1 cortex AGAAGGAGGT 168.2 0.1682 Hypothalamus AGAAGGAGGT 19.9 0.0199 E12.5 retina AAGCTGTTTG (2) AGAAGGAGGT GAGGAGCTGA (3) TGTGTAGTGC 37.6 0.0376 E14.5 retina AAGCTGTTTG (2) AGAAGGAGGT GGACCCCAAA TGTGTAGTGC 20 0.02 E16.5 retina AAGCTGTTTG (2) AAGGGAAAAT AGAAGGAGGT GGACCCCAAA TGTGTAGTGC 30.8 0.0308 E18.5 retina AAGCTGTTTG (2) AGAAGGAGGT GAGGAGCTGA (3) TGTGTAGTGC 45.5 0.0455 P0.5 retina AAGCTGTTTG (2) AGAAGGAGGT GGACCCCAAA GTCATAGCTG (2) TGTGTAGTGC 127.6 0.1276 P2.5 retina AGAAGGAGGT GAGGAGCTGA (3) GTCATAGCTG (2) TGTGTAGTGC 35.3 0.0353 P4.5 retina AGAAGGAGGT GAGGAGCTGA (3) GTCATAGCTG (2) 17.9 0.0179 P6.5 retina AAGGGAAAAT AGAAGGAGGT GTCATAGCTG (2) TGTGTAGTGC 30 0.03 P10.5 crx- retina AGAAGGAGGT 9.3 0.0093 P10.5 crx+ retina AGAAGGAGGT GAGGAGCTGA (3) 9.6 0.0096 Adult retinal AAGCTGTTTG (2) AGAAGGAGGT GAGGAGCTGA (3) GTCATAGCTG (2) 11.2 0.0112 ONL AGAAGGAGGT GAGGAGCTGA (3) GTCATAGCTG (2) 9.5 0.0095