| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAATGATCA (2) CACTGGTTCA CTCGACTGCT TGCAGAGGAA (3) TGGTGAAGAG
| 29.3 | 0.0293 |
| Cb medulloblastoma | CACTGGTTCA TGCAGAGGAA (3) TGGTGAAGAG TTCTGTACAG (2)
| 41.6 | 0.0416 |
| P8 GC+1d culture | TGCAGAGGAA (3) TGGTGAAGAG TTCTGTAAAG (3)
| 30.9 | 0.0309 |
| P8 GC+SHH+1d culture | CTCGACTGCT TGCAGAGGAA (3) TGGTGAAGAG
| 15.2 | 0.0152 |
| 3T3 fibroblasts | GTCATAGCTG (2) TGGTGAAGAG
| 31.5 | 0.0315 |
| E15 cortex | GAGAAGGCAC (2) GTCATAGCTG (2) TGGTGAAGAG
| 24.6 | 0.0246 |
| P1 cortex | TGGTGAAGAG
| 4.5 | 0.0045 |
| Hypothalamus | CACTGGTTCA TGCAGAGGAA (3) TGGTGAAGAG TTCTGTACAG (2)
| 23.5 | 0.0235 |
| E12.5 retina | AGCCAGAGAG TGCAGAGGAA (3) TGGTGAAGAG
| 11.3 | 0.0113 |
| E14.5 retina | TGGTGAAGAG TTCTGTACAG (2)
| 9.1 | 0.0091 |
| E16.5 retina | CTCGACTGCT GAGAAGGCAC (2) TGCAGAGGAA (3) TGGTGAAGAG TGTTCTTCCT (2)
| 27.1 | 0.0271 |
| E18.5 retina | CACTGGTTCA CTCGACTGCT TGCAGAGGAA (3) TTCTGTACAG (2)
| 7.2 | 0.0072 |
| P0.5 retina | CTCGACTGCT GTCATAGCTG (2) TGCAGAGGAA (3) TGGTGAAGAG TTCTGTAAAG (3)
| 39.3 | 0.0393 |
| P2.5 retina | CTCGACTGCT GTCATAGCTG (2) TGCAGAGGAA (3) TGGTGAAGAG TTCTGTACAG (2)
| 17.8 | 0.0178 |
| P4.5 retina | CACTGGTTCA GAGAAGGCAC (2) GTCATAGCTG (2) TGCAGAGGAA (3) TGGTGAAGAG
| 17.8 | 0.0178 |
| P6.5 retina | AAAATGATCA (2) CACTGGTTCA CTCGACTGCT GTCATAGCTG (2) TGCAGAGGAA (3) TGGTGAAGAG TTCTGTAAAG (3)
| 35 | 0.035 |
| P10.5 crx- retina | TGCAGAGGAA (3) TGGTGAAGAG TGTTCTTCCT (2) TTCTGTAAAG (3)
| 54 | 0.054 |
| P10.5 crx+ retina | AGCCAGAGAG CTCGACTGCT TGCAGAGGAA (3) TGGTGAAGAG
| 24.9 | 0.0249 |
| Adult retinal | CTCGACTGCT GAGAAGGCAC (2) GTCATAGCTG (2) TGCAGAGGAA (3) TGGTGAAGAG
| 40.9 | 0.0409 |
| ONL | GTCATAGCTG (2) TGCAGAGGAA (3) TGGTGAAGAG
| 13.3 | 0.0133 |