| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACCGGAACCT GAAATGGGGC (2) GAGCCCGCCC (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | ACCGGAACCT GACCTGAAGC GAGCCCGCCC (2)
| 11.5 | 0.0115 |
| P8 GC+1d culture | GAAATGGGGC (2) GACCTGAAGC GCTCTCTGTA
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | GACCTGAAGC
| 4.7 | 0.0047 |
| 3T3 fibroblasts | GACCTGAAGC GTCATAGCTG (2)
| 14 | 0.014 |
| E15 cortex | GACCTGAAGC GTCATAGCTG (2)
| 14.8 | 0.0148 |
| P1 cortex | GAAATGGGGC (2) GCTCTCTGTA
| 13.6 | 0.0136 |
| Hypothalamus | GACCTGAAGC
| 1.8 | 0.0018 |
| E12.5 retina | AGGGGCAGAG GACCTGAAGC
| 3.8 | 0.0038 |
| E14.5 retina | ACCGGAACCT GACCTGAAGC
| 5.4 | 0.0054 |
| E16.5 retina | GACCTGAAGC
| 5.4 | 0.0054 |
| E18.5 retina | GACCTGAAGC GCTCTCTGTA
| 10.9 | 0.0109 |
| P0.5 retina | GACCTGAAGC GTCATAGCTG (2)
| 11.8 | 0.0118 |
| P2.5 retina | GAAATGGGGC (2) GTCATAGCTG (2)
| 5.3 | 0.0053 |
| P4.5 retina | AGGGGCAGAG GACCTGAAGC GAGCCCGCCC (2) GTCATAGCTG (2)
| 13.9 | 0.0139 |
| P6.5 retina | GAAATGGGGC (2) GACCTGAAGC GTCATAGCTG (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | GAAATGGGGC (2) GACCTGAAGC GAGCCCGCCC (2)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GAAATGGGGC (2) GACCTGAAGC GAGCCCGCCC (2)
| 9.6 | 0.0096 |
| Adult retinal | GACCTGAAGC GAGCCCGCCC (2) GTCATAGCTG (2)
| 7.5 | 0.0075 |
| ONL | GAAATGGGGC (2) GACCTGAAGC GTCATAGCTG (2)
| 13.3 | 0.0133 |