Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.156506	Pcdh21	protocadherin 21	14	14 B	170677
Gene Ontology	calcium ion binding | cell growth and/or maintenance | extracellular space | homophilic cell adhesion | integral to membrane | integral to plasma membrane | membrane | receptor activity
Human Homolog	PCDH21[protocadherin 21]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 29 In Situ Hybridization Images

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SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTAGTCCCC GCTGCCCTTC GTGACTCCCA (3) 8.2 0.0082 Cb medulloblastoma GCTGCCCTTC GTGACTCCCA (3) 4.6 0.0046 P8 GC+1d culture AGTAGTCCCC GCTGCCCTTC GTGACTCCCA (3) 12.5 0.0125 P8 GC+SHH+1d culture AGTAGTCCCC GTGACTCCCA (3) 10.6 0.0106 3T3 fibroblasts GCTGCCCTTC GTGACTCCCA (3) 10.5 0.0105 E15 cortex GTGACTCCCA (3) 4.9 0.0049 P1 cortex GCTGCCCTTC GTGACTCCCA (3) 27.3 0.0273 Hypothalamus CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) 18.1 0.0181 E12.5 retina CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) 17 0.017 E14.5 retina CTGTTAACCT GCTGCCCTTC 7.3 0.0073 E16.5 retina CTGTTAACCT GTGACTCCCA (3) TTCATACAAT 16.3 0.0163 E18.5 retina CTGTTAACCT GTGACTCCCA (3) 18.2 0.0182 P0.5 retina AGTAGTCCCC CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) 29.5 0.0295 P2.5 retina CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) 38.8 0.0388 P4.5 retina CTGTTAACCT GCTGCCCTTC TTCATACAAT 57.5 0.0575 P6.5 retina AGTAGTCCCC CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) TTCATACAAT 115.1 0.1151 P10.5 crx- retina CTGTTAACCT GTGACTCCCA (3) TTCATACAAT 70.6 0.0706 P10.5 crx+ retina CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) TTCATACAAT 107.6 0.1076 Adult retinal AGTAGTCCCC CAGTGAATTG CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) TTCATACAAT 74.2 0.0742 ONL CAGTGAATTG CTGTTAACCT GCTGCCCTTC GTGACTCCCA (3) 111 0.111