Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1627	Rdh13	retinol dehydrogenase 13 (all-trans and 9-cis)	7		108841
Gene Ontology	metabolism | oxidoreductase activity
Human Homolog	RDH13[retinol dehydrogenase 13 (all-trans and 9-cis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTCCCACTG (3) GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 76.6 0.0766 Cb medulloblastoma GAGGGAGCAG (2) GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 143.3 0.1433 P8 GC+1d culture ATGGAGGTCA CTTCCCACTG (3) GAGGGAGCAG (2) GCTTTGGGGG GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 86.7 0.0867 P8 GC+SHH+1d culture ATGGAGGTCA CTTCCCACTG (3) GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 125.2 0.1252 3T3 fibroblasts CTTCCCACTG (3) TACTCTGTTG (2) TGGTTGCTGG 234.8 0.2348 E15 cortex ATGGAGGTCA CTTCCCACTG (3) TGGTTGCTGG 286.9 0.2869 P1 cortex ATGGAGGTCA GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 99.9 0.0999 Hypothalamus GAGGGAGCAG (2) GTTAAAAAAA (2) TGGTTGCTGG 360.5 0.3605 E12.5 retina CTTCCCACTG (3) GAGGGAGCAG (2) GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 167.2 0.1672 E14.5 retina GTTAAAAAAA (2) TGGTTGCTGG 956.5 0.9565 E16.5 retina ATGGAGGTCA CTTCCCACTG (3) GAGGGAGCAG (2) GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 793.2 0.7932 E18.5 retina ATGGAGGTCA CTTCCCACTG (3) GTTAAAAAAA (2) TGGTTGCTGG 285.5 0.2855 P0.5 retina ATGGAGGTCA CTTCCCACTG (3) GCTTTGGGGG GTTAAAAAAA (2) TGGTTGCTGG 221.9 0.2219 P2.5 retina CTTCCCACTG (3) GTTAAAAAAA (2) TGGTTGCTGG 175.9 0.1759 P4.5 retina CTTCCCACTG (3) GTTAAAAAAA (2) TGGTTGCTGG 166.5 0.1665 P6.5 retina ATGGAGGTCA CTTCCCACTG (3) GTTAAAAAAA (2) TACTCTGTTG (2) TGGTTGCTGG 180 0.18 P10.5 crx- retina ATGGAGGTCA CTTCCCACTG (3) GAGGGAGCAG (2) GTTAAAAAAA (2) TGGTTGCTGG 293.6 0.2936 P10.5 crx+ retina ATGGAGGTCA GTTAAAAAAA (2) TGGTTGCTGG 119.2 0.1192 Adult retinal ATGGAGGTCA CTTCCCACTG (3) TACTCTGTTG (2) TGGTTGCTGG 224.2 0.2242 ONL CTTCCCACTG (3) GCTTTGGGGG GTTAAAAAAA (2) TGGTTGCTGG 406 0.406