Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1627	Rdh13	retinol dehydrogenase 13 (all-trans and 9-cis)	7		108841
Gene Ontology	metabolism | oxidoreductase activity
Human Homolog	RDH13[retinol dehydrogenase 13 (all-trans and 9-cis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC CTTCCCACTG (3) 1.6 0.0016 P8 Cb GC TACTCTGTTG (2) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma GAGGGAGCAG (8) 2.3 0.0023 Cb medulloblastoma TACTCTGTTG (2) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture CTTCCCACTG (3) 9.1 0.0091 P8 GC+1d culture GAGGGAGCAG (8) 2.3 0.0023 P8 GC+1d culture TACTCTGTTG (2) 2.3 0.0023 P8 GC+1d culture ATGGAGGTCA 1.1 0.0011 P8 GC+1d culture GCTTTGGGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture CTTCCCACTG (3) 15.2 0.0152 P8 GC+SHH+1d culture ATGGAGGTCA 2.3 0.0023 P8 GC+SHH+1d culture TACTCTGTTG (2) 2.3 0.0023 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts CTTCCCACTG (3) 7 0.007 3T3 fibroblasts TACTCTGTTG (2) 7 0.007 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex ATGGAGGTCA 4.9 0.0049 E15 cortex CTTCCCACTG (3) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex ATGGAGGTCA 4.5 0.0045 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 P1 cortex TACTCTGTTG (2) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus GAGGGAGCAG (8) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina CTTCCCACTG (3) 1.9 0.0019 E12.5 retina GAGGGAGCAG (8) 1.9 0.0019 E12.5 retina TACTCTGTTG (2) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTTAAAAAAA (26) 20 0.02 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina CTTCCCACTG (3) 3.6 0.0036 E16.5 retina ATGGAGGTCA 1.8 0.0018 E16.5 retina GAGGGAGCAG (8) 1.8 0.0018 E16.5 retina TACTCTGTTG (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina CTTCCCACTG (3) 3.6 0.0036 E18.5 retina ATGGAGGTCA 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CTTCCCACTG (3) 23.6 0.0236 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina ATGGAGGTCA 2 0.002 P0.5 retina GCTTTGGGGG (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina CTTCCCACTG (3) 3.5 0.0035 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina CTTCCCACTG (3) 4 0.004 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina ATGGAGGTCA 3.3 0.0033 P6.5 retina CTTCCCACTG (3) 3.3 0.0033 P6.5 retina TACTCTGTTG (2) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina GAGGGAGCAG (8) 3.7 0.0037 P10.5 crx- retina ATGGAGGTCA 1.9 0.0019 P10.5 crx- retina CTTCCCACTG (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina ATGGAGGTCA 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal CTTCCCACTG (3) 5.6 0.0056 Adult retinal ATGGAGGTCA 1.9 0.0019 Adult retinal TACTCTGTTG (2) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL CTTCCCACTG (3) 1.9 0.0019 ONL GCTTTGGGGG (3) 1.9 0.0019