| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTGGGTAACT (2) GGCTGCCCCT
| 11.4 | 0.0114 |
| Cb medulloblastoma | CTGGGTAACT (2)
| 6.9 | 0.0069 |
| P8 GC+1d culture | ACCATCTCAG (2) CCACAATCTG (4) CTGGGCAAGT CTGGGTAACT (2) GATTAATAAA (3)
| 20.4 | 0.0204 |
| P8 GC+SHH+1d culture | CTGGGTAACT (2) GATTAATAAA (3) GGATTTAATT
| 28.2 | 0.0282 |
| 3T3 fibroblasts | CTGGGTAACT (2)
| 14 | 0.014 |
| E15 cortex | AAATGTAAAG (3) CTGGGTAACT (2)
| 19.7 | 0.0197 |
| P1 cortex | CTGGGTAACT (2)
| 4.5 | 0.0045 |
| Hypothalamus | ACCATCTCAG (2) CTGGGCAAGT CTGGGTAACT (2) GGCTGCCCCT
| 9 | 0.009 |
| E12.5 retina | AAATGTAAAG (3) CTGGGCAAGT CTGGGTAACT (2) GATTAATAAA (3)
| 13.2 | 0.0132 |
| E14.5 retina | CTGGGTAACT (2)
| 3.6 | 0.0036 |
| E16.5 retina | CTGGGCAAGT CTGGGTAACT (2) GATTAATAAA (3) GGATTTAATT
| 23.5 | 0.0235 |
| E18.5 retina | AAATGTAAAG (3) CTGGGTAACT (2) GATTAATAAA (3)
| 18.2 | 0.0182 |
| P0.5 retina | GGCTGCCCCT
| 2 | 0.002 |
| P2.5 retina | CTGGGTAACT (2)
| 7 | 0.007 |
| P4.5 retina | ACCATCTCAG (2) CTGGGTAACT (2) GATTAATAAA (3)
| 25.8 | 0.0258 |
| P6.5 retina | AAATGTAAAG (3) CTGGGTAACT (2) GATTAATAAA (3)
| 13.3 | 0.0133 |
| P10.5 crx- retina | CCACAATCTG (4) CTGGGCAAGT CTGGGTAACT (2)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | AAATGTAAAG (3) CTGGGTAACT (2)
| 13.4 | 0.0134 |
| Adult retinal | AAATGTAAAG (3) CTGGGCAAGT CTGGGTAACT (2) GATTAATAAA (3) GGATTTAATT
| 9.5 | 0.0095 |
| ONL | AAATGTAAAG (3) CTGGGTAACT (2)
| 11.5 | 0.0115 |