Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.172605	Rnf11	ring finger protein 11	4		29864
Mm.172605	C76876	expressed sequence C76876	4		97129
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTCATAGT (2) ATGGAAATAT (3) GAGCCAGAGG GTGCAGTCTA (2) TGGGTTCTGA TTTAAATTGT (2) 11.3 0.0113 Cb medulloblastoma ATGGAAATAT (3) CACAAAAGTT (3) GGATCTACTG (3) GTGCAGTCTA (2) TGTTTTTTTT 25.4 0.0254 P8 GC+1d culture ATGGAAATAT (3) CACAAAAGTT (3) GGATCTACTG (3) GTGCAGTCTA (2) TGGGTTCTGA TGTTTTTTTT 12.4 0.0124 P8 GC+SHH+1d culture ACTTCATAGT (2) ATGGAAATAT (3) CACAAAAGTT (3) GAGCCAGAGG GGATCTACTG (3) GTGCAGTCTA (2) TACAGTTGCT TTTAAATTGT (2) 11.9 0.0119 3T3 fibroblasts GAGCCAGAGG TACAGTTGCT TGGGTTCTGA 45.5 0.0455 E15 cortex GAGCCAGAGG 4.9 0.0049 P1 cortex GTGCAGTCTA (2) TGTTTTTTTT TTTAAATTGT (2) 18.1 0.0181 Hypothalamus ATGGAAATAT (3) GTGCAGTCTA (2) TACAGTTGCT TCAATTAAAT (2) TGGGTTCTGA TTTAAATTGT (2) 28.9 0.0289 E12.5 retina ATGGAAATAT (3) GAGCCAGAGG GTGCAGTCTA (2) TCAATTAAAT (2) TGGGTTCTGA 18.9 0.0189 E14.5 retina ATGGAAATAT (3) GAGCCAGAGG TCAATTAAAT (2) TGGGTTCTGA TGTTTTTTTT 12.7 0.0127 E16.5 retina ACTTCATAGT (2) ATGGAAATAT (3) GGATCTACTG (3) TGGGTTCTGA 7.2 0.0072 E18.5 retina GGATCTACTG (3) GTGCAGTCTA (2) 3.6 0.0036 P0.5 retina ATGGAAATAT (3) TGGGTTCTGA TGTTTTTTTT 7.9 0.0079 P2.5 retina ATGGAAATAT (3) TACAGTTGCT TGGGTTCTGA 5.4 0.0054 P4.5 retina ATGGAAATAT (3) CACAAAAGTT (3) GAGCCAGAGG GTGCAGTCTA (2) TACAGTTGCT TGTTTTTTTT 15.9 0.0159 P6.5 retina ATGGAAATAT (3) CACAAAAGTT (3) GTGCAGTCTA (2) TGGGTTCTGA 16.7 0.0167 P10.5 crx- retina ATGGAAATAT (3) GTGCAGTCTA (2) TACAGTTGCT 13 0.013 P10.5 crx+ retina ATGGAAATAT (3) TGGGTTCTGA TGTTTTTTTT TTTAAATTGT (2) 11.5 0.0115 Adult retinal ACTTCATAGT (2) ATGGAAATAT (3) CACAAAAGTT (3) TTTAAATTGT (2) 13.1 0.0131 ONL ATGGAAATAT (3) TTTAAATTGT (2) 13.4 0.0134