Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.17815	Slc9a6	solute carrier family 9 (sodium/hydrogen exchanger), isoform 6	X		236794
Gene Ontology	antiporter activity | integral to membrane | ion transport | membrane | mitochondrion | mitochondrion | regulation of pH | sodium ion transport | sodium:hydrogen antiporter activity | solute:hydrogen antiporter activity | transport
Human Homolog	SLC9A6[solute carrier family 9 (sodium/hydrogen exchanger), isoform 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTCTGAATG (2) TTTCTTTTTA 8.1 0.0081 Cb medulloblastoma TCTCTGAATG (2) TGTTACTTTT (2) TTAAAGGTAA 13.8 0.0138 P8 GC+1d culture AGTGAACGCT GGGATGCTGC (2) TCTCTGAATG (2) TGTTACTTTT (2) 11.4 0.0114 P8 GC+SHH+1d culture AGTGAACGCT TCTCTGAATG (2) TTTCTTTTTA 10.6 0.0106 3T3 fibroblasts AGTGAACGCT 3.5 0.0035 E15 cortex AGTGAACGCT 4.9 0.0049 Hypothalamus AGTGAACGCT TCTCTGAATG (2) TTAAAGGTAA 9 0.009 E12.5 retina TGTTACTTTT (2) 3.8 0.0038 E14.5 retina TCTCTGAATG (2) 5.5 0.0055 E16.5 retina TCTCTGAATG (2) 7.2 0.0072 E18.5 retina TCTCTGAATG (2) TGTTACTTTT (2) TTTCTTTTTA 12.7 0.0127 P0.5 retina AGTGAACGCT TCTCTGAATG (2) TGTTACTTTT (2) 11.8 0.0118 P2.5 retina TCTCTGAATG (2) TGTTACTTTT (2) TTTCTTTTTA 12.4 0.0124 P4.5 retina TCTCTGAATG (2) 19.8 0.0198 P6.5 retina AGTGAACGCT GGGATGCTGC (2) TCTCTGAATG (2) TGTTACTTTT (2) TTAAAGGTAA TTTCTTTTTA 40.1 0.0401 P10.5 crx- retina TCTCTGAATG (2) 26 0.026 P10.5 crx+ retina AGTGAACGCT TCTCTGAATG (2) TGTTACTTTT (2) 40.3 0.0403 Adult retinal AGTGAACGCT TCTCTGAATG (2) TTAAAGGTAA 74.2 0.0742 ONL GGGATGCTGC (2) TCTCTGAATG (2) 65.1 0.0651