| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 71.7 | 0.0717 |
| Cb medulloblastoma | AGGAAGACGG GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 210.4 | 0.2104 |
| P8 GC+1d culture | AAAGAAGACC AAGGAAGACG ATCTGTGGCT (2) ATGCTGCCAG GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 94.6 | 0.0946 |
| P8 GC+SHH+1d culture | AAAGAAGACC AAGGAAGACG AGGAAGACGG ATGCTGCCAG GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 155.8 | 0.1558 |
| 3T3 fibroblasts | GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 28 | 0.028 |
| E15 cortex | AGGAAGACGG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 29.6 | 0.0296 |
| P1 cortex | AGGAAGACGG ATCTGTGGCT (2) TAAAAAAAAA (3) TCAAAAAAAA (2)
| 81.7 | 0.0817 |
| Hypothalamus | TAAAAAAAAA (3) TCAAAAAAAA (2) TTGAAGAATC
| 77.8 | 0.0778 |
| E12.5 retina | TAAAAAAAAA (3) TCAAAAAAAA (2)
| 43.2 | 0.0432 |
| E14.5 retina | TAAAAAAAAA (3) TCAAAAAAAA (2)
| 83.8 | 0.0838 |
| E16.5 retina | GTGGCACTGG (2) TAAAAAAAAA (3) TCAAAAAAAA (2) TTGAAGAATC
| 47 | 0.047 |
| E18.5 retina | ATCTGTGGCT (2) GCCTGCTGTG GTGGCACTGG (2) TAAAAAAAAA (3) TCAAAAAAAA (2)
| 163.6 | 0.1636 |
| P0.5 retina | GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 70.7 | 0.0707 |
| P2.5 retina | AAAGAAGACC ATGCTGCCAG GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 114.5 | 0.1145 |
| P4.5 retina | GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 164.4 | 0.1644 |
| P6.5 retina | GCCTGCTGTG GTGGCACTGG (2) TAAAAAAAAA (3) TCAAAAAAAA (2)
| 100.1 | 0.1001 |
| P10.5 crx- retina | ATCTGTGGCT (2) GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 29.8 | 0.0298 |
| P10.5 crx+ retina | TAAAAAAAAA (3) TCAAAAAAAA (2)
| 42.3 | 0.0423 |
| Adult retinal | GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 40.8 | 0.0408 |
| ONL | GCCTGCTGTG TAAAAAAAAA (3) TCAAAAAAAA (2)
| 45.9 | 0.0459 |