Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.181485	B830007D08Rik	RIKEN cDNA B830007D08 gene	9		77850
Mm.181485	D230010O13Rik	RIKEN cDNA D230010O13 gene	9		319390
Mm.181485	6330586M15Rik	RIKEN cDNA 6330586M15 gene	9		319225
Mm.181485	Nck1	non-catalytic region of tyrosine kinase adaptor protein 1	9		17973
Gene Ontology	actin filament organization | cell migration | kinase activity | lamellipodium biogenesis | protein binding | receptor activity | vesicle membrane
Human Homolog	NCK1[NCK adaptor protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTATTTTTG (4) GTTTGCCTGA (3) TCAGTAATTT 11.4 0.0114 Cb medulloblastoma AGTATTTTTG (4) TCAGTAATTT 6.9 0.0069 P8 GC+1d culture AATAAACACA (3) GTTTGCCTGA (3) TCAGTAATTT 17.1 0.0171 P8 GC+SHH+1d culture AATAAACACA (3) TCAGTAATTT 11.7 0.0117 3T3 fibroblasts GTTTGCCTGA (3) 10.5 0.0105 E15 cortex AATAAAACAG (4) GTTTGCCTGA (3) 14.8 0.0148 P1 cortex AAATAAAAAC (3) GTTTGCCTGA (3) 9 0.009 Hypothalamus AATAAACACA (3) TCAGTAATTT 19.9 0.0199 E12.5 retina AAATAAAAAC (3) AATAAACACA (3) TCAGTAATTT 7.6 0.0076 E14.5 retina AGTATTTTTG (4) GTTTGCCTGA (3) TCAGTAATTT 23.6 0.0236 E16.5 retina CAGAAGCAGG TCAGTAATTT 18.1 0.0181 E18.5 retina AATAAAACAG (4) GTTTGCCTGA (3) TCAGTAATTT 7.2 0.0072 P0.5 retina GTTTGCCTGA (3) TCAGTAATTT 5.9 0.0059 P2.5 retina AAATAAAAAC (3) GTTTGCCTGA (3) TCAGTAATTT 15.9 0.0159 P4.5 retina GTTTGCCTGA (3) TCAGTAATTT 9.9 0.0099 P6.5 retina AATAAACACA (3) TCAGTAATTT 11.7 0.0117 P10.5 crx- retina GTTTGCCTGA (3) TCAGTAATTT 18.6 0.0186 P10.5 crx+ retina AAATAAAAAC (3) AATAAACACA (3) GTTTGCCTGA (3) TCAGTAATTT 15.3 0.0153 Adult retinal AATAAAACAG (4) CAGAAGCAGG TCAGTAATTT 7.5 0.0075 ONL CAGAAGCAGG TCAGTAATTT 3.8 0.0038