Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19131	C3	complement component 3	17	17 34.3 cM	12266
Gene Ontology	complement activation | complement activation, alternative pathway | complement activation, classical pathway | endopeptidase inhibitor activity | extracellular | extracellular space | inflammatory response | positive regulation of phagocytosis | protein binding
Human Homolog	C3[complement component 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GGGCAGGGGA (2) 9.2 0.0092 P8 GC+1d culture CAAACTCAAA CCCAACTCAA GGGCAGGGGA (2) TATTCAATCA (2) TGGGGCCTCT 13.6 0.0136 P8 GC+SHH+1d culture AGCAAAGATA (3) AGGAGAGGTG (2) TGCTGGGGTA TGGGGCCTCT 9.5 0.0095 3T3 fibroblasts GTATTCCAAG (2) TGGGGCCTCT 7 0.007 P1 cortex AGCAAAGATA (3) 9.1 0.0091 Hypothalamus GGGCAGGGGA (2) TTACAGGAAT (2) 32.6 0.0326 E12.5 retina AGGAGAGGTG (2) CAAACTCAAA 3.8 0.0038 E14.5 retina ATTCTCAGGT CAAACTCAAA CCCAACTCAA GGGCAGGGGA (2) TATTCAATCA (2) 12.6 0.0126 E16.5 retina AGCAAAGATA (3) ATTCTCAGGT CCCAACTCAA GGGCAGGGGA (2) 14.4 0.0144 E18.5 retina AGGAGAGGTG (2) CCCAACTCAA GGGCAGGGGA (2) GTATTCCAAG (2) TATTCAATCA (2) 12.6 0.0126 P0.5 retina AGCAAAGATA (3) CCCAACTCAA 4 0.004 P2.5 retina AGCAAAGATA (3) CCCAACTCAA GGGCAGGGGA (2) TATTCAATCA (2) TGCTGGGGTA TTACAGGAAT (2) 17.7 0.0177 P4.5 retina AGGAGAGGTG (2) CAAACTCAAA GGGCAGGGGA (2) 10 0.01 P6.5 retina AGGAGAGGTG (2) GGGCAGGGGA (2) GTATTCCAAG (2) 8.4 0.0084 P10.5 crx- retina AGCAAAGATA (3) CAAACTCAAA CCCAACTCAA GGGCAGGGGA (2) GTATTCCAAG (2) TATTCAATCA (2) 16.9 0.0169 P10.5 crx+ retina AGCAAAGATA (3) CCCAACTCAA GGGCAGGGGA (2) 9.6 0.0096 Adult retinal AGGAGAGGTG (2) CCCAACTCAA GGGCAGGGGA (2) 27.8 0.0278 ONL AGGAGAGGTG (2) CCCAACTCAA 15.3 0.0153