| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGTGGCTAAT (3) AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 17.9 | 0.0179 |
| Cb medulloblastoma | AGTGGCTAAT (3) AGTGTGGAAT (2) TATAGAAAAA (2) TATAGAACAC
| 25.4 | 0.0254 |
| P8 GC+1d culture | AGTGGCTAAT (3) AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2) TATAGAACAC
| 14.7 | 0.0147 |
| P8 GC+SHH+1d culture | AGTGGCTAAT (3) AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 17.6 | 0.0176 |
| 3T3 fibroblasts | CGCTCTGGGG (3)
| 3.5 | 0.0035 |
| E15 cortex | AGTGGCTAAT (3) TGCAGTGCGT
| 9.8 | 0.0098 |
| P1 cortex | AGTGGCTAAT (3) CGCTCTGGGG (3) TATAGAAAAA (2)
| 13.5 | 0.0135 |
| Hypothalamus | AGTGGCTAAT (3) AGTGTGGAAT (2) TATAGAACAC TGCAGTGCGT
| 9 | 0.009 |
| E12.5 retina | AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 33.8 | 0.0338 |
| E14.5 retina | AGTGTGGAAT (2) TATAGAAAAA (2)
| 14.6 | 0.0146 |
| E16.5 retina | AGTGTGGAAT (2) TATAGAAAAA (2)
| 10.8 | 0.0108 |
| E18.5 retina | AGTGGCTAAT (3) AGTGTGGAAT (2) TATAGAAAAA (2)
| 36.4 | 0.0364 |
| P0.5 retina | AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 19.7 | 0.0197 |
| P2.5 retina | AGTGTGGAAT (2) TATAGAAAAA (2)
| 10.5 | 0.0105 |
| P4.5 retina | AGTGGCTAAT (3) AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 27.8 | 0.0278 |
| P6.5 retina | AGTGTGGAAT (2) TATAGAAAAA (2)
| 15 | 0.015 |
| P10.5 crx- retina | AGTGGCTAAT (3) AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | AGTGGCTAAT (3) AGTGTGGAAT (2) CGCTCTGGGG (3) TATAGAAAAA (2)
| 15.3 | 0.0153 |
| Adult retinal | AGTGTGGAAT (2) CGCTCTGGGG (3) TGCAGTGCGT
| 9.3 | 0.0093 |
| ONL | AGTGTGGAAT (2) TATAGAAAAA (2)
| 11.5 | 0.0115 |