Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196721	AW822243	expressed sequence AW822243	12		105055
Mm.196721	Brf1	BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)	12		72308
Gene Ontology	biological_process unknown | cellular_component unknown | translation initiation factor activity
Human Homolog	BRF1[BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGCTGG (2) GTCAGAGAGT (2) GTGGAGCCGC (2) 4.8 0.0048 Cb medulloblastoma GTGGAGCCGC (2) 2.3 0.0023 P8 GC+1d culture AACAAAGGAC (2) AAGCAGCTGG (2) GTGGAGCCGC (2) TTTTGAGCAA (2) 5.6 0.0056 P8 GC+SHH+1d culture GTGGAGCCGC (2) TTTTGAGCAA (2) 5.9 0.0059 3T3 fibroblasts GTCATAGCTG (2) 10.5 0.0105 E15 cortex GCAGCATCCA (2) GTCATAGCTG (2) 9.8 0.0098 Hypothalamus AAGCAGCTGG (2) GCAGCATCCA (2) GTCAGAGAGT (2) 7.2 0.0072 E12.5 retina GCAGCATCCA (2) GTGGAGCCGC (2) 3.8 0.0038 E14.5 retina ATTCCCAATA (2) GCAGCATCCA (2) GTCAGAGAGT (2) TTTTGAGCAA (2) 19.9 0.0199 E16.5 retina GCAGCATCCA (2) GTCAGAGAGT (2) TTTTGAGCAA (2) 10.8 0.0108 E18.5 retina GCAGCATCCA (2) GTCAGAGAGT (2) TTTTGAGCAA (2) 9 0.009 P0.5 retina ATTCCCAATA (2) GCAGCATCCA (2) GTCAGAGAGT (2) GTCATAGCTG (2) TTTTGAGCAA (2) 19.7 0.0197 P2.5 retina AAGCAGCTGG (2) GTCATAGCTG (2) TTTTGAGCAA (2) 8.8 0.0088 P4.5 retina AAGCAGCTGG (2) ATTCCCAATA (2) GCAGCATCCA (2) GTCAGAGAGT (2) GTCATAGCTG (2) GTGGAGCCGC (2) TTTTGAGCAA (2) 23.9 0.0239 P6.5 retina AAGCAGCTGG (2) GTCAGAGAGT (2) GTCATAGCTG (2) TTTTGAGCAA (2) 13.3 0.0133 P10.5 crx- retina ATTCCCAATA (2) GCAGCATCCA (2) TTTTGAGCAA (2) 11.2 0.0112 P10.5 crx+ retina GCAGCATCCA (2) TTTTGAGCAA (2) 9.6 0.0096 Adult retinal GTCAGAGAGT (2) GTCATAGCTG (2) GTGGAGCCGC (2) TTTTGAGCAA (2) 9.4 0.0094 ONL AACAAAGGAC (2) GCAGCATCCA (2) GTCATAGCTG (2) 11.4 0.0114