| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGCCAAAAAA (4) ATTTAATAAA
| 8.1 | 0.0081 |
| Cb medulloblastoma | AGCCAAAAAA (4) ATTTAATAAA
| 37 | 0.037 |
| P8 GC+1d culture | AGCCAAAAAA (4) ATTTAATAAA GAGAATGGCT (2) GGGCCTGCTC GTTCATTTAG (3)
| 21.6 | 0.0216 |
| P8 GC+SHH+1d culture | AGCCAAAAAA (4) GGGCCTGCTC
| 29.2 | 0.0292 |
| 3T3 fibroblasts | GGGCCTGCTC
| 3.5 | 0.0035 |
| E15 cortex | AGCCAAAAAA (4) GTTCATTTAG (3)
| 9.8 | 0.0098 |
| P1 cortex | ATTTAATAAA GGGCCTGCTC
| 9 | 0.009 |
| Hypothalamus | ATTTAATAAA GAGAATGGCT (2) GGGCCTGCTC
| 5.4 | 0.0054 |
| E12.5 retina | AGCCAAAAAA (4) GGGCCTGCTC
| 9.4 | 0.0094 |
| E14.5 retina | AGCCAAAAAA (4) ATTTAATAAA GGGCCTGCTC
| 9.1 | 0.0091 |
| E16.5 retina | AGCCAAAAAA (4) ATTTAATAAA GGGCCTGCTC
| 7.2 | 0.0072 |
| E18.5 retina | AGCCAAAAAA (4) GGGCCTGCTC GTTCATTTAG (3) TACCAACAAA (3)
| 21.8 | 0.0218 |
| P0.5 retina | AGCCAAAAAA (4) GGGCCTGCTC GTTCATTTAG (3)
| 21.6 | 0.0216 |
| P2.5 retina | AGCCAAAAAA (4) ATTTAATAAA GGGCCTGCTC GTTCATTTAG (3) TACCAACAAA (3)
| 21.2 | 0.0212 |
| P4.5 retina | ATTTAATAAA GGGCCTGCTC TACCAACAAA (3)
| 19.8 | 0.0198 |
| P6.5 retina | AGCCAAAAAA (4) ATTTAATAAA GAGAATGGCT (2) GGGCCTGCTC GTTCATTTAG (3)
| 26.8 | 0.0268 |
| P10.5 crx- retina | AGCCAAAAAA (4) ATTTAATAAA GGGCCTGCTC GTTCATTTAG (3)
| 13 | 0.013 |
| P10.5 crx+ retina | AGCCAAAAAA (4) ATTTAATAAA GGGCCTGCTC GTTCATTTAG (3)
| 32.6 | 0.0326 |
| Adult retinal | AGCCAAAAAA (4) GGGCCTGCTC
| 81.5 | 0.0815 |
| ONL | AGCCAAAAAA (4) ATTTAATAAA GGGCCTGCTC
| 59.4 | 0.0594 |