| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAAAAAA (2) CTTATGACAT (3) TATTCTGAAA (3)
| 50.5 | 0.0505 |
| Cb medulloblastoma | CAAAAAAAAA (2) CCTCTCCAGT (3) CTTATGACAT (3)
| 101.7 | 0.1017 |
| P8 GC+1d culture | CAAAAAAAAA (2) CAGGTCTGCA (3) CTTATGACAT (3) TATTCTGAAA (3)
| 41 | 0.041 |
| P8 GC+SHH+1d culture | CAAAAAAAAA (2) CCTCTCCAGT (3) CTTATGACAT (3) TATTCTGAAA (3)
| 65.4 | 0.0654 |
| E15 cortex | CAAAAAAAAA (2)
| 34.6 | 0.0346 |
| P1 cortex | CAAAAAAAAA (2) CTTATGACAT (3)
| 27.2 | 0.0272 |
| Hypothalamus | CAAAAAAAAA (2) CAGGTCTGCA (3) CCTCTCCAGT (3) TATTCTGAAA (3)
| 45.2 | 0.0452 |
| E12.5 retina | CAAAAAAAAA (2) CTTATGACAT (3)
| 24.4 | 0.0244 |
| E14.5 retina | CAAAAAAAAA (2) TATTCTGAAA (3)
| 10.9 | 0.0109 |
| E16.5 retina | CAAAAAAAAA (2) CCTCTCCAGT (3)
| 10.9 | 0.0109 |
| E18.5 retina | CAAAAAAAAA (2) TATTCTGAAA (3)
| 43.6 | 0.0436 |
| P0.5 retina | CAAAAAAAAA (2) CTTATGACAT (3)
| 139.4 | 0.1394 |
| P2.5 retina | CAAAAAAAAA (2) CCTCTCCAGT (3) CTTATGACAT (3) TATTCTGAAA (3)
| 59.9 | 0.0599 |
| P4.5 retina | CAAAAAAAAA (2) CTTATGACAT (3)
| 43.6 | 0.0436 |
| P6.5 retina | CAAAAAAAAA (2) CCTCTCCAGT (3) CTTATGACAT (3)
| 40 | 0.04 |
| P10.5 crx- retina | CAAAAAAAAA (2) CCTCTCCAGT (3)
| 16.7 | 0.0167 |
| P10.5 crx+ retina | CAAAAAAAAA (2) CAGGTCTGCA (3) CCTCTCCAGT (3)
| 38.4 | 0.0384 |
| Adult retinal | CAAAAAAAAA (2) CAGGTCTGCA (3) CCTCTCCAGT (3) CTTATGACAT (3)
| 27.9 | 0.0279 |
| ONL | CAAAAAAAAA (2)
| 17.2 | 0.0172 |