Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.203125	2700050F09Rik	RIKEN cDNA 2700050F09 gene	5		72587
Human Homolog	PAN3[PABP1-dependent poly A-specific ribonuclease subunit PAN3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCGCGTCGCT TTTTTTTTCC (3) 13 0.013 Cb medulloblastoma GGAAGAAAGG TCGCGTCGCT TGACCAAGCC (2) TTTTTTTTCC (3) 11.5 0.0115 P8 GC+1d culture GGAAGAAAGG TATTTGAGGA (2) TTTTTTTTCC (3) 5.7 0.0057 P8 GC+SHH+1d culture GGAAGAAAGG TCGCGTCGCT TTTTTTTTCC (3) 13 0.013 3T3 fibroblasts GTCATAGCTG (2) TATTTGAGGA (2) TCGCGTCGCT TTTTTTTTCC (3) 24.5 0.0245 E15 cortex GGAAGAAAGG GTCATAGCTG (2) TCGCGTCGCT 24.6 0.0246 P1 cortex ATTTCAAGGG 4.5 0.0045 Hypothalamus TTTTTTTTCC (3) 12.7 0.0127 E12.5 retina ATTTCAAGGG GGAAGAAAGG TCGCGTCGCT TGACCAAGCC (2) TTTTTTTTCC (3) 18.9 0.0189 E14.5 retina ATTTCAAGGG GGAAGAAAGG TTTTTTTTCC (3) 21.8 0.0218 E16.5 retina GGAAGAAAGG TCGCGTCGCT TTTTTTTTCC (3) 50.7 0.0507 E18.5 retina ATTTCAAGGG GGAAGAAAGG TGACCAAGCC (2) TTTTTTTTCC (3) 27.2 0.0272 P0.5 retina ATTTCAAGGG GTCATAGCTG (2) TATTTGAGGA (2) TCGCGTCGCT TGACCAAGCC (2) TTTTTTTTCC (3) 19.6 0.0196 P2.5 retina GTCATAGCTG (2) TCGCGTCGCT TGACCAAGCC (2) TTTTTTTTCC (3) 12.4 0.0124 P4.5 retina GTCATAGCTG (2) TCGCGTCGCT TTTTTTTTCC (3) 13.9 0.0139 P6.5 retina ATTTCAAGGG GTCATAGCTG (2) TCGCGTCGCT TTTTTTTTCC (3) 13.2 0.0132 P10.5 crx- retina ATTTCAAGGG GGAAGAAAGG TCGCGTCGCT 11.2 0.0112 P10.5 crx+ retina TCGCGTCGCT TTTTTTTTCC (3) 5.7 0.0057 Adult retinal GGAAGAAAGG GTCATAGCTG (2) TCGCGTCGCT TTTTTTTTCC (3) 11.3 0.0113 ONL GGAAGAAAGG GTCATAGCTG (2) TATTTGAGGA (2) TTTTTTTTCC (3) 13.3 0.0133