Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.207004	Prkaa1	protein kinase, AMP-activated, alpha 1 catalytic subunit	15		105787
Gene Ontology	fatty acid oxidation | glucose metabolism | kinase activity
Human Homolog	PRKAA1[protein kinase, AMP-activated, alpha 1 catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGGAACTT 1.6 0.0016 Cb medulloblastoma AAAGGAACTT GTGATGGAAT (3) TATATATACA (2) 13.8 0.0138 P8 GC+1d culture TATATATACA (2) 1.1 0.0011 P8 GC+SHH+1d culture TATATATACA (2) TTAAGAAAAA (4) 2.4 0.0024 P1 cortex AGAAATCAAC GTGATGGAAT (3) 9 0.009 Hypothalamus AAAGGAACTT GTGATGGAAT (3) GTTTGGGGGG 9 0.009 E12.5 retina AAAGGAACTT 1.9 0.0019 E16.5 retina ATTACGCCAA 1.8 0.0018 E18.5 retina AGAAATCAAC 1.8 0.0018 P0.5 retina AAAGGAACTT ATTACGCCAA GTTTGGGGGG 6 0.006 P2.5 retina AAAGGAACTT TTAAGAAAAA (4) 5.3 0.0053 P10.5 crx- retina AAAGGAACTT 1.9 0.0019 P10.5 crx+ retina AGAAATCAAC TATATATACA (2) 3.8 0.0038 Adult retinal ATTACGCCAA 3.7 0.0037 ONL TTAAGAAAAA (4) 1.9 0.0019